Dermabacter hominis: CYJ49_008620
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Entry
CYJ49_008620 CDS
T09110
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dhm
Dermabacter hominis
Pathway
dhm00300
Lysine biosynthesis
dhm00550
Peptidoglycan biosynthesis
dhm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CYJ49_008620
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CYJ49_008620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dhm01011
]
CYJ49_008620
Enzymes [BR:
dhm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CYJ49_008620
Peptidoglycan biosynthesis and degradation proteins [BR:
dhm01011
]
Precursor biosynthesis
Amino acid ligase
CYJ49_008620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
WIK60494
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Position
1939268..1940848
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AA seq
526 aa
AA seq
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MSDRTDLMLGDLARQLEGAPGAGVLELRGRSVPISSVTIDSRKAGTGALFVAVQGENAHG
ASYAEAALSQGCAAILTDEAGAAIVNDAHPGGDYSVLVCEDPRALAGFAANLVYGEPSHA
IPLIGVTGTNGKTSVTTMCARTLQELGESAGIVGTNGTFLAWAGGREEQIPTERTTPEAT
DVHALMRHMVDEGMTCAALEVSSHAMVLHRVAAVQFEVAVFTNLSQDHLDFHKDMEEYFE
AKASLFTPAHAKRGIVCVDDEWGRRLAAHASVPVTTYSAKGHEADFTVGEIRRGEYGTVF
TVQPSEGEPFSLESALPGTHYVANTLAVALVLRALGFEGEAVRRALAVAGTVPGRMERVG
ESDACPRVVVDYSHTPDALEQALETLHTLEGVGKIVTVFGAGGHRDSLKRPIMGEIAARL
SDRVFVTDDNPRDEDPASIRRDVLAGIPTTCRADVENVGDRAEAIARAIGEADARDVVLI
AGKGAESGQVLADRTIEFDDRVHARTALETWQRAHKADLTTEVRDA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatcgcaccgatctcatgctgggagatctcgcccggcagctcgaaggggcgcct
ggagcgggcgtactcgagctgcgcggtaggagtgtgccgatctcatccgtgacgatcgat
tcccgcaaggcgggaaccggcgctctcttcgtcgccgttcagggtgaaaacgcgcacgga
gcgagctacgccgaggcggcgctcagccagggctgcgccgcaattctcacggacgaagcg
ggcgctgcgatcgtgaacgacgcgcatccggggggcgactactcggtgctcgtgtgcgag
gatccccgcgcgctcgcgggcttcgccgcaaatctcgtgtatggcgagccctcgcatgcc
atcccgctaatcggtgtgaccggaacgaacggcaagacttcggtcacgacgatgtgtgcg
cgcacgctccaagagctcggtgaaagtgccggaatcgtcggcacgaacgggacgtttctc
gcgtgggcaggcgggcgcgaggagcaaattccgacggagcgcacgacccccgaggcgact
gacgtccacgcgcttatgcgccacatggtcgacgagggcatgacgtgtgctgcgctcgaa
gtatcgagccacgcgatggtgctccacagagtagccgccgtccagttcgaggttgcggtg
tttacgaacctcagccaggaccacctcgactttcacaaggacatggaggagtacttcgag
gcgaaggcgtcactgtttacgcccgcgcatgcgaagcggggaatcgtgtgtgtcgacgac
gagtggggccgtcgtctcgcagcccatgcgagcgttccggtgacgacgtactccgcaaaa
ggacacgaagccgacttcacggtgggggagatccgccgcggagagtacggaacggtgttc
accgtgcaaccgtcggaaggtgaacctttttcgctcgaaagcgcgcttccgggaacccac
tacgtagccaataccctcgcggtcgcactcgtccttcgagcactcggcttcgagggggag
gcggtgcgccgggcgcttgcggtggcgggcacggtcccggggcgcatggagagggtcggg
gagtccgacgcttgcccgcgcgtcgtcgtggactattcgcacactccggacgctcttgag
caggctctcgagacgctccatacccttgagggtgtcggaaaaatcgtgacggtttttggt
gcgggtgggcacagggattcgctcaaacggccgatcatgggagagatcgctgcgcgactt
tctgatcgcgtgttcgtcacggacgacaatccgcgcgatgaggatccggcatcgattagg
cgcgatgtgctcgcgggcattccgacgacgtgccgtgccgacgtcgagaacgtgggagat
cgtgccgaagcgatcgcgcgagcgatcggcgaagcggatgcgcgtgacgtcgtgcttatc
gcgggcaaaggcgcggaaagcggacaggtactcgccgatcgcacgattgagttcgacgac
cgggtccacgcacgcacggcgctagagacgtggcagcgtgcacataaggcggacctgacg
acggaggtgcgcgatgcgtaa
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