Maridesulfovibrio hydrothermalis: DESAM_22625
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Entry
DESAM_22625 CDS
T02428
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dhy
Maridesulfovibrio hydrothermalis
Pathway
dhy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DESAM_22625 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhy03400
]
DESAM_22625 (nth)
Enzymes [BR:
dhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DESAM_22625 (nth)
DNA repair and recombination proteins [BR:
dhy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DESAM_22625 (nth)
Prokaryotic type
DESAM_22625 (nth)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
CCO24892
UniProt:
L0RFA1
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All DBs
Position
3032564..3033226
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AA seq
220 aa
AA seq
DB search
MKNTIPDKKTLARASVIYDRLLKRYPDPEPELDWKNAWELLVSTVLAAQCTDVRVNKITP
ALFSKWPGPEEMCKAEVAEIEEVIRSTGLFRNKAKNLKAASVLVMEEFNGQLPRSMKEMI
RLPGVARKTANIVLSNAMDIHEGLAVDTHVKRLSFRMGLTGSTNPTVIERDLMPLFKRKT
WGITNHLLVLFGRDICPARSPKCDICELNDICPQNGIEKK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacaataccggataaaaaaacactcgccagagcatctgtaatttatgatcgc
ctgctcaaaagatatcctgacccggaacccgagctggactggaaaaatgcatgggaactt
cttgtttccaccgttctcgccgcccagtgcactgatgtgcgggtcaataaaattacgccc
gcccttttcagcaaatggcccggtcccgaagagatgtgcaaggctgaagttgctgagatt
gaagaagtgatccgttccacagggctgttccgcaataaagctaagaaccttaaggcagct
tcagtgctggtcatggaagaatttaacgggcaattgcccagatccatgaaagaaatgatc
agactccccggtgttgcccgtaaaacggcaaatattgtgctctccaatgctatggatatt
cacgaagggcttgctgttgatacccatgtaaaacgactttcatttagaatgggacttact
ggcagcacaaacccgactgtaattgaaagagatttgatgcctttgttcaaaaggaagaca
tggggaataaccaaccatctgctggttcttttcggacgggatatctgcccggccagaagc
cctaaatgtgacatctgtgaacttaacgatatatgcccgcaaaacggaattgagaaaaaa
taa
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