Dickeya poaceiphila: Dpoa569_0003409
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Entry
Dpoa569_0003409 CDS
T06188
Symbol
ubiC
Name
(GenBank) chorismate lyase
KO
K03181
chorismate lyase [EC:
4.1.3.40
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00130
Ubiquinone and other terpenoid-quinone biosynthesis
dic01100
Metabolic pathways
dic01110
Biosynthesis of secondary metabolites
dic01240
Biosynthesis of cofactors
Module
dic_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
dic_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Dpoa569_0003409 (ubiC)
Enzymes [BR:
dic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.40 chorismate lyase
Dpoa569_0003409 (ubiC)
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Motif
Pfam:
Chor_lyase
Motif
Other DBs
NCBI-ProteinID:
QDX31391
UniProt:
A0A5B8IAY1
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All DBs
Position
complement(3746320..3746835)
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AA seq
171 aa
AA seq
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MSDEALASLHSVEWCAPEDLPASVADWLVYRDSMTRRLERYCMRLTVQVGKEQFVSSLDM
AGEPELLPLSERYWLREVTLLGDGNPWLFGRTVIPEQTLEEADIDLTQVGNTPLGRYLYL
QGPPPRDVIQTGRCGSLWVRRSRVLLSGNPLLITELFLPDAPVYFPDAHQG
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaggcgttggctagcctgcactcggttgagtggtgcgcgcccgaagattta
cctgcgtccgtggcggattggttggtttaccgcgattcgatgacgcgccgtctggaacgg
tattgtatgcgattgaccgtgcaggtcggcaaagagcagtttgtgtcgtcgctggatatg
gctggtgagccggagttgttgccgctgagtgagcgctattggctacgtgaggtaacgctg
ttaggtgacggcaatccctggttatttggtcgcacggtaataccggagcagacgctggaa
gaggctgatattgacctgacgcaggtcggtaatacgcctctggggcgttatttgtattta
caagggccaccgccgcgcgatgtcattcaaactggtcgatgcggatcattgtgggtgcgg
cgttcacgtgtgcttttgtcgggcaatccgttgctgatcaccgagctatttttgccggat
gcccccgtttatttccccgacgcccatcagggctga
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