Dietzia sp. DQ12-45-1b: GJR88_02065
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Entry
GJR88_02065 CDS
T11395
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
did Dietzia sp. DQ12-45-1b
Pathway
did00300
Lysine biosynthesis
did00550
Peptidoglycan biosynthesis
did01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
did00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GJR88_02065
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJR88_02065
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
did01011
]
GJR88_02065
Enzymes [BR:
did01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GJR88_02065
Peptidoglycan biosynthesis and degradation proteins [BR:
did01011
]
Precursor biosynthesis
Amino acid ligase
GJR88_02065
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QGW24377
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Position
1422098..1423657
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AA seq
519 aa
AA seq
DB search
MTTAAQLADAVQASLLGDRAAADAELTGATIRAQDAGTGTLFAALPGSRIHGASFCATAV
EAGASAVLTDTEGLELMGPVADRVPVLVHPRPRSVLGEVAAAVVGDPSADLDVVGITGTS
GKTTTTYLVEAALEGCGLVAGLIGTTGSRVGGRHLPSSLTTPEAPEFQSLLSEMRAGGAR
AVAAEVSSHALRLGRVDGTRFAVGAFLNLSQDHLDFHPSMEDYFRAKARLFDSDADPGSA
VRPAERAVIVVDDDWGRRLLAARPDAVTVSADPRGSADWTAGEALTTDDDRQAFAAWGPH
GVTVEVDLPLLGRFNVTNALVALAIVDALGLDVRAAAAGLSSVRVPGRLEPVVRGQDFRV
LVDYAHKPAAVAAVLRSVRAQTRGRVAVVLGAGGDRDPGKRPLMGAAAAEVADLVVVTDD
NPRSEDPAAIRASVRAGAEAAAGEGTGIEEIADRGAAIAAAIDWARSGDAVVIAGKGHET
GQEIEGVVFPFDDRTRAAEELIRRMEYTDPSVRTEDNTS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagcagcacagctggctgacgcggtgcaggcgagcctcctcggtgacagggcg
gcagccgacgcggagctgaccggcgccaccatccgggcccaagacgcgggaaccggcacg
ctcttcgccgcgctgcccgggtcgaggatccacggcgcctccttctgcgcgacggcggtc
gaggcgggcgcgtcggccgtactcaccgacaccgagggcctggagttgatgggtcccgtg
gccgaccgcgtcccggtgctggtgcacccgcgaccccggtccgttctgggcgaggtggcg
gcggccgtcgtcggtgacccctctgctgacctggacgtcgtggggatcaccgggacgtcc
ggcaagacgacgacgacctatctcgtggaggcggcgctcgagggctgtggcctcgtggcg
ggactcatcggcaccactggcagcagggtgggcggacggcacctgccgagcagtctcacg
actcctgaagcgcccgaattccagtcgctgctgagtgagatgcgagccgggggtgcccgc
gccgtcgccgcagaggtctccagccatgcgttgcggctcggtcgggtggacgggacacgg
ttcgccgtcggcgccttcctcaatctctcccaggatcatctcgacttccacccgagcatg
gaggactacttccgggccaaagcccggttgttcgactccgacgccgacccgggttccgcg
gtgcggcccgccgagcgggccgtgatcgtcgtcgacgacgactgggggagacgactgctg
gcggcccgaccggacgcggtgaccgtctcggccgatccccgcgggtccgccgactggacg
gcgggcgaggcgttgaccaccgacgacgatcggcaggcgttcgccgcgtgggggccgcac
ggggtgaccgtggaggtcgatctaccgctcctcggccggttcaacgtgaccaatgcgctc
gtcgcactcgcgatcgtcgacgccctcggtctcgatgttcgggccgcggccgccggactg
agcagcgtgcgggtgccggggcgcctcgagccggtcgtccgtgggcaggatttccgcgtc
ctcgtggactacgcccacaaaccggccgcggtcgccgcggtcctgaggtccgtgcgtgcg
cagacccggggacgggtcgcagtggtcctgggcgcgggcggggacagggatccgggcaag
cgacctctcatgggtgcggcggccgcggaggtcgcggacctcgtggtggtgaccgacgac
aacccgcgcagcgaggaccccgccgcgatccgcgcgtcggttcgtgcgggtgccgaggcc
gctgccggcgaggggaccggcatcgaggagatagcggaccggggagccgcgatcgccgcg
gcgatcgactgggcccgctccggcgacgcggtggtgatcgcgggcaagggccacgagacc
gggcaggagatcgagggagtggtcttccccttcgacgaccggacccgcgcggccgaggag
ctcatcagacgcatggaatacaccgacccatcggtccggacggaggacaacacctcatga
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