Diaphorobacter sp. JS3050: HND92_01660
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Entry
HND92_01660 CDS
T10221
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij01501
beta-Lactam resistance
dij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HND92_01660
01503 Cationic antimicrobial peptide (CAMP) resistance
HND92_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dij03036
]
HND92_01660
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dij02000
]
HND92_01660
01504 Antimicrobial resistance genes [BR:
dij01504
]
HND92_01660
Chromosome and associated proteins [BR:
dij03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HND92_01660
Transporters [BR:
dij02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HND92_01660
Antimicrobial resistance genes [BR:
dij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HND92_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
BSH_CzcB
HH_EMRA
BSH_CusB
CzcB_C
HH_YBHG
HH_CzcB
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QJY31805
LinkDB
All DBs
Position
348574..349704
Genome browser
AA seq
376 aa
AA seq
DB search
MSVKFPTAARAALAVAAAGMLVACGGKPEGQGGPQGPAAVGVFAVQTQAVTLSTELPGRT
VASRVAEVRPQTSGIVQKRLFEEGSVVKQGQALYQIDPATMNARLVKAQAQLQSTENLAK
RYAVLREKNAISQQQYDDAMSAWRNAQADVELARIDTVYAKVLSPIAGRIGRSQVTEGAL
VGVGQAQPMATVQQIDPMHVDMQQSMTDILRLQAANAQASAKVRLVLEDGSVYPVPGTLK
FSEVNVDESTGSVTLRATFANPDGLLRPGMFVRAQLQTGTKPEALLVPQQAVWRNTQGKS
MVWVVGDDNVAKPRPVNAVRTVGNTWLVEGGLQSGERVITEGLQKLRGEMPVQPVPAQNV
DIVTDLYAVNAVGKGD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaagtttccaacggcggcccgtgcggctttggctgtggcggcagcaggcatg
ttggtggcatgcggcggcaaacccgagggccagggcggcccccagggccctgctgccgtg
ggcgtttttgccgtgcagacccaggcggtgactttgagcaccgaattgcccggccgcacc
gtggcttcgcgcgtggccgaggtgcgcccccagaccagcggcatcgtgcaaaagcgcctg
tttgaagagggcagcgtggtcaagcagggccaggcgctgtaccagattgacccggccacc
atgaatgcgcgcctggtcaaggcccaggcccagctgcaaagcaccgagaaccttgccaag
cgctatgccgtgctgcgcgagaaaaacgccatcagccagcagcagtacgacgacgccatg
agtgcctggcgcaacgcgcaggctgacgtggagctggcacgcatcgacaccgtctatgcc
aaggtgctgtcgcccatcgcgggccgcattggccgctcgcaggtgaccgaaggcgcgctg
gtcggtgtgggccaggcgcagcccatggcgacggtgcagcagatcgatcccatgcatgtg
gacatgcagcagtccatgacggacatcctgcgcctgcaggccgccaatgcccaggccagc
gccaaagtgcgcctggttctggaggacggcagcgtctatcccgtgccgggcacgctcaag
ttttctgaggtcaatgtggatgaaagcacgggctctgtgaccttgcgcgccacttttgcc
aaccccgacggcctgctgcgcccgggcatgtttgtgcgcgcccagctgcagacgggcacc
aagccagaggcgctgctggtgccgcagcaggccgtgtggcgcaacacccagggcaagtcc
atggtctgggtggtgggcgatgacaacgtggccaagccgcgccccgtgaacgcggtgcgc
acggtgggcaacacctggctggtggaaggcggcctgcagtccggcgagcgcgtgatcacc
gaaggcctgcagaagctgcgtggcgagatgccagtgcagccggtgcctgcccagaacgtg
gacatcgtgaccgacctgtacgccgtgaacgccgtgggcaagggcgactga
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