Diaphorobacter sp. JS3050: HND92_12690
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Entry
HND92_12690 CDS
T10221
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij01501
beta-Lactam resistance
dij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HND92_12690
01503 Cationic antimicrobial peptide (CAMP) resistance
HND92_12690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dij03036
]
HND92_12690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dij02000
]
HND92_12690
01504 Antimicrobial resistance genes [BR:
dij01504
]
HND92_12690
Chromosome and associated proteins [BR:
dij03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HND92_12690
Transporters [BR:
dij02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HND92_12690
Antimicrobial resistance genes [BR:
dij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HND92_12690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
YknX_C
CzcB_C
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QJY33737
LinkDB
All DBs
Position
2634401..2635741
Genome browser
AA seq
446 aa
AA seq
DB search
MIHATTPAPIERPARAPRLSASPAFSPSCTSAARHGALAQRLAGLALALGLAACGGKDAP
ATEPQGPAAVGVVTLQTRAQQLDATLPGRTRAYLTAEVRPQVSGIVQQRLFTEGALVRKG
QPLYQIDDRPLRATEASAEATLARAEATARTQEANARRNAELVKIDAISRQAHDESQAAA
AQARADVGVARANLETARINLRYSRIEAPIAGRISLSSVTPGALVTANQANALTTIVQMD
PMYVDFTQSSTELVQLKRDWEAGRYQKVDGNQMRVRIRLDDGSDYPHEGRLQFAGVIVND
TTGTVTLRAVVPNPDGVLMPGMYVQALLPTGLASDALLIPQQSVNRDLTGRASVLVVNAD
NVVEKRPVELARALGNRWLVDSGLQPGERLVVDGFQRIKPGNKVAPQVVDLNTKKGPAAA
APAPAASAPPAAGQSVDITARPGASR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatccacgcgacgacacccgcgcccattgagcgccccgcccgcgccccccgtctttcc
gcttcacccgctttttccccctcgtgcacctctgcggcccgtcacggcgcgctcgcgcag
cggctggctggcctggccctggcgctgggcctggcggcctgtggcggcaaggacgcgcca
gccaccgagccacagggccccgccgccgtgggcgtggtcaccctgcaaacgcgcgcgcag
caactggacgccaccttgcccggccgcacccgcgcctacctgaccgccgaggtgcgcccc
caggtctcgggcatcgtgcagcagcgcctgttcaccgagggtgcgctggtgcgcaagggc
cagccgctgtaccagatcgacgaccgcccgctgcgcgccaccgaggccagcgccgaggcc
accctggcccgcgccgaggccacggcgcgcacgcaggaggccaatgcgcgccgcaatgcc
gaactggtcaagatcgacgccatcagccgccaggcccatgacgagagccaggccgcggcc
gcgcaggcccgcgccgacgtgggcgtggcccgcgccaacctggagacggcgcgcatcaac
ctgcgctacagccgcatcgaggcgcccatcgccggacgcatcagcctgtccagcgtcacc
cctggcgcgctggtgacggccaaccaggccaatgcgctcaccaccatcgtgcagatggac
ccgatgtacgtggacttcacccagtccagcaccgagctggtacagctcaagcgcgactgg
gaggccggccgctaccagaaggtggacggcaaccagatgcgcgtgcgcatccggctggac
gacggcagcgactacccgcacgagggccggctgcagttcgccggcgtgatcgtcaacgac
accacaggcacggtgacgctgcgcgccgtggtgcccaaccccgacggcgtgctcatgccc
ggcatgtatgtgcaggcgctgctgcccacgggcctggccagcgacgcgctgctgatcccg
cagcagtccgtgaaccgcgacctgacgggccgcgccagcgtgctggtggttaacgccgac
aacgtggtcgagaaacgccccgtggaactggcgcgtgccttgggcaaccgctggctggtg
gacagcggcctgcaacccggcgagcgcctggtggtggatggctttcaacgcatcaagccc
ggcaacaaggtggcgccccaggtggtggacctgaacaccaagaagggcccggccgccgcg
gcgccagcacccgccgccagcgccccccccgcggcgggccagagcgtggacatcaccgcc
cgccccggcgcatcccgctga
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