Dietzia sp. oral taxon 368: C3V38_12160
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Entry
C3V38_12160 CDS
T05390
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit00300
Lysine biosynthesis
dit00550
Peptidoglycan biosynthesis
dit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C3V38_12160
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C3V38_12160
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dit01011
]
C3V38_12160
Enzymes [BR:
dit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C3V38_12160
Peptidoglycan biosynthesis and degradation proteins [BR:
dit01011
]
Precursor biosynthesis
Amino acid ligase
C3V38_12160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AVM65008
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Position
2609072..2610631
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AA seq
519 aa
AA seq
DB search
MTTARQLADAVGARLLGDRSGADVDLTGATIRAQDCGPGILFAALPGTRVHGASFGATAV
EAGAAAVLTDPEGVELMSAVAGRLPVLVHPAPRAVLGAVSAAVTGDPSADLDVVGITGTS
GKTTTTYLVEAALERCGHVAGLIGTTGSRVDGRALPSRLTTPEAPEFQALLARMRAEGAR
AVAAEVSSHALRLGRVDGVRFAVGAFLNLSQDHLDFHPSMDDYFRAKARLFDVEADPGSA
VWPAERAVVVIDDEWGRRLVGMRPDAVTVSADPDADADWTAGESTPTDRDTQEFTVHGPR
GLTVDVELPLMGRFNVANALVALAIVDALGGDVAAAAGGLMRVRVPGRLEPVVRGQDFRV
LVDYAHKPGAVAAVLRSVRAQTEGRVAVVLGAGGDRDPGKRPKMGAAAAEIADLVVVTDD
NPRSEDPAAIRAAVRAGAEQAAGPDTRVEEVGDRGAAIATAIDWARAGDVVVIAGKGHET
GQEVAGVVHPFDDRARAAEELVRRLGYRAPTGETEDSTP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcgcgacagctggcagatgcggtgggggccaggctcctcggcgacaggtcc
ggggccgacgtcgacctcaccggggcgaccatccgggcccaggactgcggtccgggcatc
ctcttcgccgccctgcccggtacccgggtccacggcgcctccttcggtgccaccgccgtc
gaggcgggcgcggccgcggtgctcaccgaccccgagggcgtcgaactgatgtccgccgtc
gccggacgcctgcccgtcctcgtccaccccgccccgcgggcggtactcggcgccgtgtcc
gcggcggtgaccggcgacccgtccgccgacctcgacgtcgtcggcatcaccggcacctcc
ggcaagaccaccaccacctacctcgtcgaggccgccctcgagaggtgcgggcacgtggcc
ggtctcatcggcaccaccggtagccgcgtggacggccgcgccctgcccagccgactcacc
acccccgaggcccccgagttccaggcactactcgcccggatgcgggccgagggcgcccgc
gccgtcgcggccgaggtgtccagccacgccctgcggctcggccgggtggacggcgtccgg
ttcgccgtgggtgcgttcctcaacctgtcacaggaccacctcgacttccacccgagcatg
gacgactacttccgcgccaaggcgcggctgttcgacgtcgaggcggaccccggctcggcg
gtgtggccggccgagcgggcggtcgtcgtcatcgacgacgagtggggccggcgcctggtg
gggatgcgcccggacgcggtgaccgtctccgccgatcccgacgccgacgccgactggacg
gccggcgagtcaaccccgacggaccgcgacacccaggagttcaccgtccacgggccccgc
gggttgaccgtggacgtcgagctcccgctgatgggccggtttaacgtggccaacgccctc
gtggcgctggcgatcgtcgacgccctgggtggggacgtcgccgccgccgcgggcgggctc
atgcgggtgcgggtgcccggccgtctcgagccggtcgtgcgcggtcaggacttccgcgtc
ctcgtggactacgcccacaagcccggtgcggtcgccgcggtcctgcgttcggtccgcgcg
cagaccgaggggcgcgtggccgtggtcctcggcgccggaggcgaccgcgacccgggcaag
cggcccaagatgggcgccgccgcggccgagatcgccgacctcgtggtggtgaccgacgac
aacccccgcagcgaggaccccgccgccatccgcgccgccgtccgcgcgggggccgaacag
gccgccgggcccgacacccgcgtcgaggaggtcggcgaccgcggcgccgcgatcgccacc
gcgatcgactgggcccgcgccggcgacgtcgtcgtgatcgccgggaagggacacgagacc
ggtcaggaggtcgccggcgtcgtgcacccgttcgacgaccgggccagggccgcggaagaa
ctcgtcagacgactcggataccgcgcccccacgggcgagacggaggacagcacaccatga
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