Dietzia sp. JS16-p6b: CT688_02470
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Entry
CT688_02470 CDS
T05397
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT688_02470 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_02470 (nth)
Enzymes [BR:
diz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CT688_02470 (nth)
DNA repair and recombination proteins [BR:
diz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CT688_02470 (nth)
Prokaryotic type
CT688_02470 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AVZ41008
LinkDB
All DBs
Position
548453..549187
Genome browser
AA seq
244 aa
AA seq
DB search
METDLGRTRRARRMLRTLEDAFPHVYCELDFRNPLELSVATILSAQCTDKRVNEVTPALF
ARYRTAADYAGADREELETLIRPTGFYRNKARSIQGLGAALVEKFDGEVPRRLEDLVTLP
GFGRKTANVVLGNAFGVPGLTVDTHFMRLVARWKWTEATDPVRIEREVAALLPRPTWTDA
SHRIIFHGRRVCHARTAACGACALASDCPSAGEVGPLDPVAAARLVVGPERSHLLEMVGL
GDQA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaccgacctcgggcgcacccgccgcgcccggcgcatgctccgcaccctggaggac
gcgttcccccacgtctactgcgagctggatttccggaacccgctcgagctgagcgtcgcg
acgatcctgtccgcgcagtgcacggacaagcgcgtcaacgaggtcacgccggcgctgttc
gcccggtatcggaccgcggccgactacgcgggcgcggaccgtgaggaactggagacactg
atccgaccgaccggcttctaccgcaacaaggcgcggagtatccaggggctgggtgcggcg
ctggtggagaagttcgacggcgaggttccgcggcggctcgaggacctggtcaccctcccc
ggattcggacggaagacggccaacgtggtgctcggcaacgcgttcggtgtgcccggactg
acggtggacacccacttcatgcgtctggtcgcccggtggaagtggacagaggccaccgat
ccggtgcgcatcgagcgcgaggtggccgcgctgctgccccggcccacctggaccgacgcc
agccaccggatcatcttccacggtcgccgggtctgtcacgcgaggacggcggcctgcggt
gcgtgtgccctggcctcggactgcccgtccgccggcgaggtcggcccgctcgacccggtg
gccgccgcccgcctcgtggtggggcccgagcgatcgcacctgttggagatggtcggactg
ggggatcaggcgtga
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