Dermabacter jinjuensis: COP05_03060
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Entry
COP05_03060 CDS
T06191
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj00300
Lysine biosynthesis
djj00550
Peptidoglycan biosynthesis
djj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
COP05_03060
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
COP05_03060
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
djj01011
]
COP05_03060
Enzymes [BR:
djj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
COP05_03060
Peptidoglycan biosynthesis and degradation proteins [BR:
djj01011
]
Precursor biosynthesis
Amino acid ligase
COP05_03060
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
ATH96186
UniProt:
A0ABM6PKQ5
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All DBs
Position
674285..675787
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AA seq
500 aa
AA seq
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MRGESVPISTVTIDSRKAGEKALFVAVQGENAHGASYASAALEQGCAAILTDEAGAAILR
SAHPVAQYSTLVCEDPRALAGFAANLVYGEPSREIPLVGVTGTNGKTSVTTMCARTLQAL
GESTGIVGTNGTFLAWAGGREEKIPTERTTPEAADVHALLRHMVEEGMTSAALEVSSHAM
VLHRVAGVSFDVAVFTNLSQDHLDFHKDMEDYFEAKASLFTPEHAKRGIVCVDDEWGRRL
AKLATIPVTTYSVHGHDADFTVGEITRGEYGTVFVVQPSEGAPFTLESALPGTHYVANTL
AVALVLRALGFEGGKVRKALAAAGTVPGRMERVGESDACPRVVVDYSHTPDALEHALETL
HTLENVGEIVTVFGAGGHRDALKRPLMGEVAARLSDRVFVTDDNPRDEEPALIRQDVLAG
IPEGSRARVENVGDRAEAIARAIGEAKINDVVLIAGKGAESGQVLADRTIDFDDRVHARD
ALRTWAKRNATWMMKEEHDA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaggcgaaagcgtgccgatttcgacagtcacaatcgactcccgcaaagcgggtgaa
aaggcgctttttgtcgcggttcagggggaaaatgcccacggcgcgagctacgcttccgca
gcccttgagcagggatgtgccgcgattctcacggacgaggcgggtgcagcgatcctgaga
tccgcgcatccggtggcgcaatactccactctcgtgtgcgaggatcctcgcgcgctcgcg
ggtttcgcagcgaaccttgtctacggagaaccgtcgcgcgaaatcccgctcgtgggcgtg
acgggcaccaacggtaaaacctccgtgacaacgatgtgcgcgcgtactcttcaagcactc
ggcgagagcacggggatcgtcggtaccaatggcactttccttgcctgggcgggcgggcgc
gaagaaaagattccgacggagcgtacgacccccgaagcggccgacgtgcacgcgctcttg
cgccacatggtggaggagggtatgacgtccgccgcgctcgaggtttcgagccacgccatg
gtcctgcacagggtcgcgggcgtgtcgttcgatgtcgcggttttcacgaatctcagccag
gatcacctcgatttccacaaggatatggaggactacttcgaggcgaaggcttcccttttc
actcctgagcatgcgaagcgaggcatcgtgtgcgttgacgatgagtggggtcgccgactt
gcgaaacttgccaccattccggtcaccacatactcagtgcacggtcacgatgctgatttt
acggtgggggaaatcacgcggggagaatacggaacggtgtttgtggtgcagccgtcggaa
ggcgcccccttcacgctcgaaagcgcgctccccggcacccactatgtcgccaacaccctc
gcggtcgcgctcgtgttgcgtgcactcggcttcgagggcgggaaggtccgtaaagccctc
gcggccgcgggtacggttccgggccgcatggaaagggtgggggagtccgacgcttgcccg
cgcgtcgtcgtggactattcccacactcccgacgcgctcgagcacgccctcgagactctc
cacacccttgagaacgtgggggaaatcgtcacagtttttggtgctggggggcaccgcgat
gcgctgaaacggccacttatgggggaagtcgcggcgcgactttcggatcgcgtgttcgtg
acggacgacaatccgcgcgatgaggagcccgcgttgattaggcaggacgtgcttgcggga
atccccgagggctctcgcgcgagagtcgagaacgtaggtgatcgagccgaggcgatcgcc
cgagccatcggtgaggccaagatcaatgacgttgtgctcatcgcgggaaagggagcggaa
agcgggcaggtgctcgcagatcgcacgatcgactttgatgatcgcgtgcacgcgcgcgat
gcgcttcgtacatgggcgaagaggaacgccacctggatgatgaaggaggagcacgatgcg
taa
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