Dermabacter jinjuensis: COP05_04405 Help Entry COP05_04405       CDS       T06191                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism djj  Dermabacter jinjuensis Pathway djj03030   DNA replication djj03410   Base excision repair djj03420   Nucleotide excision repair djj03430   Mismatch repair Brite KEGG Orthology (KO) [BR:djj00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     COP05_04405    03410 Base excision repair     COP05_04405    03420 Nucleotide excision repair     COP05_04405    03430 Mismatch repair     COP05_04405  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:djj03032]     COP05_04405    03400 DNA repair and recombination proteins [BR:djj03400]     COP05_04405 Enzymes [BR:djj01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      COP05_04405 DNA replication proteins [BR:djj03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      COP05_04405 DNA repair and recombination proteins [BR:djj03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      COP05_04405    NER (nucleotide excision repair)     GGR (global genome repair) factors      COP05_04405    MMR (mismatch excision repair)     DNA ligase      COP05_04405   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       COP05_04405 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH RNA_lig_T4_1 BRCT_2 Motif Other DBs NCBI-ProteinID:  ATH96419 UniProt:  A0ABM6PNG1 LinkDB All DBs Position 960386..962800 Genome browser AA seq 804 aa AA seqDB search MSTEQTPSTNASEIAAAADPAEMTALEAEGRILDLRERLAEARVEYYENDSPIMADGEYD ALERELKSLEEEFPEFASEESPTQTVGGAVAQGFASVPHIERMMSLDNAFSLDEIREWAK RCQEDAPGTPQFLTELKIDGLAISLVYENGTLLRGVTRGDGRVGEDVTANVKTIRNVPHT LSTEKPPALLEVRGEVFFPVDEFEKLNEERREAGLREFANPRNTAAGSLRQKDSSITASR ALEVYVHGIGAHEGAVGYPESQSEVYEMLASWGLPTSPHFEVLDSLEQVTQYIERAGRKR HDFEHDIDGIVIKINDFAHQRALGATSRAPRWAIAYKYPPEEVTTKLLDIQVDVGRTGRV TPFGVMEPVKVAGSTVARATLHNQFDVERKGVLIGDTVILRKAGDVIPEILGPVEKLRDG TEKPFVMPKNCPSCGAEIRPEKEGDKDWRCPNQKDCPSQVTGRIAHAASRGAFDIEALGD ESAIALTDPDKRRAEALASLKAGHALYLPVLTEEDFHSAAFVTLKNGVATDDADGVPMLR ITDPDDPRIPAPRSGVVRTGANLFDLTPEDLREVTVYQSVRRDGEETGDWRTVSAFWNRP QWRYYKSRKSWSLVKPATVGKTTEVLMSELDKAKSAGLWRVLVALSIRHVGPTAARTLAT AWGSIDAIASASVEELAKTDGVGETIATSVAAFFQEEWHAELVEAWKRSGVVVVDESTSG IEKTLEGLTIVVTGSLEGYTRDGAKEAILQRGGKASGSVSKKTNYVVVGENAGSKAAKAE QLGIPILDEEGFTSLLEGGENALP NT seq 2415 nt NT seq  +upstreamnt  +downstreamnt gtgagtaccgagcagacaccgagcacgaacgcctcagagatcgccgcagccgccgacccc gccgagatgaccgcgctcgaggctgaagggcgcattctcgacctgcgcgaacgcctcgca gaggcacgcgtcgaatactacgagaacgactcaccgatcatggccgacggcgaatacgac gccctcgagcgtgaactcaagagcctcgaggaagagtttcccgagtttgcgagcgaggag tcacccacccagaccgtgggcggcgcggttgcccagggattcgcctcggttcctcacatc gagcgcatgatgagcctcgacaacgccttcagcctcgacgagattcgcgagtgggcaaag cgttgccaggaggatgcgcccggaacgccccagttcctgacggaactcaagattgacggc ctcgccatttcgctcgtgtacgaaaatggcacactcttgcgcggcgtgacgcgcggcgac ggtcgcgtgggcgaggacgtcaccgcgaatgtcaagacgatccgcaatgtgccgcacact ctgagcactgaaaagcctcccgcacttctcgaagtgcgcggcgaggtgttcttcccggtt gacgagttcgaaaaactcaatgaggagcgccgcgaggcggggcttcgcgagttcgcgaac cctcgcaacaccgccgcgggatcgcttcgccagaaagactcctccatcaccgcctcacgc gccctcgaggtgtacgtccacgggatcggtgcgcacgaaggcgccgtcggataccccgag agccaaagtgaggtttacgagatgctcgcctcgtggggccttcctacctctcctcacttc gaggtgctcgactcgctcgagcaggtcacgcagtacatcgaacgggcggggcgcaagcgc cacgacttcgagcacgatatcgacggcatcgtcatcaagatcaatgacttcgcccatcag cgtgctctcggagcaacgtccagggcgccgcgctgggccatcgcctacaagtacccgccc gaagaggtcacgacaaagctgctcgacattcaggttgacgtgggccgaactggccgcgtg acccccttcggcgtcatggaacccgtcaaggtcgcaggctcaacggtcgcgcgcgcgacg ctccacaaccaattcgatgtcgaacgaaagggcgtgctgatcggcgacacggtcatcctg cgcaaggccggcgatgtgatccccgagatccttggcccggtcgaaaagctccgcgacgga accgaaaaaccgttcgtcatgccgaagaactgcccgagctgtggagcagagattcggccg gaaaaagagggcgataaagactggcgttgccccaaccagaaggattgcccctcccaggtc accggtcgtatcgcgcacgctgcgagccgcggcgcctttgacattgaagcgctcggcgac gagtctgcgatcgccctcaccgatcccgataagcgccgcgccgaagccctcgcctccctc aaggccggccacgcgctctacttgccggtgctgacggaagaggatttccacagcgcagcg tttgtgacgctcaagaacggcgttgccaccgatgatgcggacggagttccaatgctccgc atcaccgaccccgacgatccccgcatccccgcaccgcgctcaggcgtcgtgcgtacgggc gcgaatctgtttgatctcacgcccgaggacctgcgcgaggtcacggtctaccagagcgtg cgccgcgacggcgaggaaacgggtgattggcgcaccgtgagcgctttttggaaccgcccg cagtggcgctactacaagtccagaaaatcgtggagcctcgtgaagccggcgaccgtcgga aaaaccaccgaggtgctcatgagcgaactcgacaaggctaaatcggcaggtctctggcgg gtgctcgtggccctctcgatccgccacgtgggtccgacggccgcccgcaccctcgcgacg gcctggggatctatcgacgcgatcgcgagtgcaagcgtcgaggaactggccaagaccgat ggcgtcggcgagacgatcgcgacgagcgtcgcggcgttcttccaggaggaatggcacgcc gagctcgttgaggcgtggaagcgctcgggtgttgtcgttgtcgacgaatcgacgagcgga atcgaaaagacgctcgaagggctcacgatcgttgtcaccggttctctcgagggctacacg cgcgatggcgcgaaagaggcgatcctgcagcgaggcggcaaggcctccggcagcgtctcg aagaagacgaactacgtcgtcgtcggcgagaatgcgggctcgaaggccgcgaaggcagag cagcttggcatcccgattctcgatgaggaaggtttcacatcgcttctcgagggtggagaa aacgccctgccgtag

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