Dellaglioa kimchii: ACE83Q_00620
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Entry
ACE83Q_00620 CDS
T11222
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
dki Dellaglioa kimchii
Pathway
dki02020
Two-component system
dki02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dki00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACE83Q_00620 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACE83Q_00620 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dki03021
]
ACE83Q_00620 (rpoN)
Transcription machinery [BR:
dki03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE83Q_00620 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_3
HTH_38
Phage_CII
LacI
Motif
Other DBs
NCBI-ProteinID:
XLP63621
LinkDB
All DBs
Position
132202..133539
Genome browser
AA seq
445 aa
AA seq
DB search
MAIEQKFKQQQTQIQKLAMTPELQQSIKMLQYNIEDLQEFVTEKVMENPLIEAIDDNQRI
QAGESRYKVNLTTTGDTDYMNSVSDDESQSLLDYLLEQIYLTMRQTPLRKVVLYLVDYIE
QTGYFNANLDDLAEESGIPPIMLLDALTLIQRLDPPGVGARNLQESLMLQIDSDDLAPKL
AYTVIKDDFDNFVDRKWADIAKKYRVNLSEIQEISDFVRTLSPNPGAGFGTTRIGKIYPD
LVLKKSNNELTLFKVRGAQPEVVFQQKYFDDMSKDQDPEVIKYLTEKKREYEWLVHGLKQ
RGDTILKVGQYILKYQADFFADKTKPIKPLLLREVAAALGVHESTISRTVNDKYIETESG
VYEIKSFFGQIANKNKKNAEELSSKTIMTTMQTLIESEDKTKPFSDQKIVLQLMKQNIDI
SRRTVAKYRENLNIPSSSARKRYKD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctattgaacagaaatttaagcaacaacaaacgcaaattcaaaaactggcaatgaca
ccagagctccaacaatcaattaaaatgttacaatataatatagaagatttacaagaattt
gtcactgaaaaagtgatggaaaaccctttgattgaagctattgatgataatcagagaatc
caagcgggggaatctcgttataaagttaatctaacaacaactggcgatactgattatatg
aattcagttagtgatgatgaatcacaatctttattggattatttattggaacaaatttat
ctaacgatgcgtcaaacaccacttagaaaggttgttctttacttagtagattatattgaa
cagacgggctattttaatgctaatttggatgatttagcagaagaatcaggaataccaccc
attatgttattagacgcgttaaccttgattcaacgcttagatccgcccggtgttggtgca
cgtaatttacaagaaagtttaatgttacagattgattctgatgacttagcacctaaattg
gcatatacagttataaaagatgattttgataattttgtcgatcgtaaatgggcagatata
gcaaaaaaatatcgtgttaatctttcagaaattcaagaaatatcagattttgttcgcaca
ttatcacctaatccaggtgctggatttgggacaactagaattggcaaaatctatccagat
ttagttttgaaaaaaagtaataatgaattaacattattcaaagttcggggtgcacagcct
gaagttgtttttcagcaaaaatattttgatgatatgtcaaaagaccaagatcctgaagta
attaaatatttaactgaaaagaaacgggaatatgaatggctagttcatggtttgaaacaa
cgtggtgataccattttaaaagtaggacaatatattttgaaatatcaggctgacttcttc
gctgataaaaccaaaccaattaagccattacttttgcgggaagttgcagccgctttaggt
gttcacgaatcaacgattagtcgaactgttaatgataagtacattgaaacagaatctggt
gtttatgaaataaaatcattctttggacaaatcgcaaataagaacaaaaagaatgctgaa
gagctatcttcgaaaacgattatgacaaccatgcagaccctaatcgaatctgaagataaa
acgaaacctttctccgatcaaaaaatagttttacaattaatgaagcaaaacatcgatatt
tcgagacggacagttgcaaaatatcgtgaaaacctgaacattccatcgtcatccgcaaga
aaacgctacaaggattag
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