Dellaglioa kimchii: ACE83Q_01675
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Entry
ACE83Q_01675 CDS
T11222
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dki Dellaglioa kimchii
Pathway
dki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE83Q_01675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dki03019
]
ACE83Q_01675
Messenger RNA biogenesis [BR:
dki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACE83Q_01675
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
XLP63816
LinkDB
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Position
343798..345525
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AA seq
575 aa
AA seq
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MSKVKIIPLGGVRENGKNMYVVEVDDDLFIFDSGLMYPENGLLGIDIVIPDFSYLRENKE
RIVGVFLTHGHADAIGALPYFVSEFDVPVFGSELTIALAKINIENDPKASKFSDFHVVND
QTEIDFGKTTISFFKTTHSIPESLGIVLGTDEGQIVYTGDFKFDQAAAPVYQTDFGRLAE
IGKNGVLALLSDSANAENPFPTVNESAIDEYINETFEYQKGRIIVACVASNILRVQQILN
AAKESHRKVILTGHDVEKIVKTAMDLKKLVLPDENLIVPMSDISKYDDDQLIILETGKMG
EPLKSLQRMALNQHSTVNIHEGDLVFITTTTSKAMETNVAKTRDLIYRAGADVKAISDEL
NSSGHAGQNDLQLMINLMKPKYLVPIQGEYRLLAAHADLAHTLGMPYDHIFITGKGDVLS
YSEGKMNLGSQVEAGNTMIDGIGVGDIGNIVLRDRKILSEDGIFIAVVTIDRKKKKIINK
PKITSRGFVYTKTSLDLIEKSAEIVSETVQDNLNNKEFDWGHLKQDVREKMSHFLYEQTK
RRPVILPVIMEINQYHRKSTKSKEVKPAETKNNEK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttaaaataattccacttggtggcgttcgagaaaatggtaaaaatatgtat
gtcgttgaagtggatgatgatctatttatttttgattctggattaatgtatccagaaaat
ggcttattagggattgatattgtaattcctgattttagttatttgagagaaaataaagaa
cgaattgtaggtgttttcttaacacatgggcatgcagatgcaattggtgcattaccatac
tttgtgagtgaatttgatgtgcctgtttttggatcagaattaacaattgcattagcaaaa
attaatatagaaaatgatcctaaggcaagtaaattttctgattttcacgttgttaatgat
cagactgagattgattttggtaaaacgacaatttcattctttaaaacgacccattcaatt
cctgaatcattaggaatcgttttaggtactgatgaagggcagattgtttatacaggtgat
tttaagttcgatcaagctgcggcaccagtttaccaaacagattttggacgtttagctgag
attggtaagaatggtgttttagcgttattaagtgattcagctaatgctgagaacccattc
ccaacagtcaatgaaagtgcaattgacgaatatattaatgaaacatttgaatatcaaaaa
ggtcgtattattgttgcctgtgtggcatcaaatatattacgagtacaacagatattaaat
gctgcaaaggaaagtcatcgaaaagttatattaacaggacatgatgttgaaaaaatcgtt
aaaacagctatggatttgaagaaattagttcttcctgatgaaaatttaattgttccaatg
agtgatattagcaaatatgacgatgatcaactaattatattggaaacaggtaaaatgggt
gaacctttaaaatcattacagcgaatggctttaaatcaacattcaactgttaatattcat
gaaggagatcttgttttcattacgacaacaacgtcaaaagctatggaaactaatgtggca
aagacaagagatctcatttaccgagcaggagctgatgtgaaagcaatttctgatgaatta
aattcttcaggtcatgctggtcaaaatgatttacaactaatgatcaatttaatgaaacca
aaatacctggttccaattcaaggtgaatatcgattacttgcggcacatgctgatttagca
catacattaggaatgccatatgatcatatctttattactggtaagggtgatgttttaagt
tattctgaaggaaaaatgaatttaggatcacaagttgaagcaggaaataccatgattgat
ggtattggtgttggcgatattggaaatattgtattgagagatcgtaaaatactttctgaa
gatggtatttttattgcagtcgtcacaattgatcgtaaaaagaagaaaatcattaataag
cctaaaattacatcaagaggatttgtttatacaaaaacgagccttgatttaattgaaaag
agtgctgaaattgtgtcagaaacagtacaagataatttgaacaataaagaatttgattgg
ggacatttaaaacaagatgttcgtgaaaaaatgagtcatttcctatatgaacaaacaaaa
cgacgtccagttattttacctgttattatggaaattaatcagtatcatagaaaatcaaca
aagtctaaagaagttaaaccggcggaaacaaaaaataacgaaaaataa
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