Dellaglioa kimchii: ACE83Q_04740
Help
Entry
ACE83Q_04740 CDS
T11222
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dki Dellaglioa kimchii
Pathway
dki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACE83Q_04740 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dki03400
]
ACE83Q_04740 (mfd)
Enzymes [BR:
dki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE83Q_04740 (mfd)
DNA repair and recombination proteins [BR:
dki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACE83Q_04740 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLP63001
LinkDB
All DBs
Position
complement(930619..934140)
Genome browser
AA seq
1173 aa
AA seq
DB search
MNLEAMMQTVPGVDNWLTNIEPNTRQLLTGLTGSAKTLMLATIFKDKKRSMLVVTDNLFH
ATQLNEDLTNFIDEEDVLTFPVEELLAAELATSSPESKSERVQTLQALLEGTPKIVVTSI
SGLRRFLAPVSTWKQATLNLAVGKDIDLKATETQLFTMGYQRQKLVERPGDFAVRGSILD
IYPLTVENPIRLDLFDTEIDSLRYFDVTNQRSLENVDQIQIIPATDFIATDTMLFEASQT
LKKAYGVEYKRLDNDDQERLESNIMPLMSDFEKGRLAPEHLLFSDIIYQGKTSLLDYLGS
NGLVVMDDYPRLLEAEKTLRLDEDNWMADKLKTHQVLSTSVFGFELRDLLKNESHAELFL
AHFQKGMGHLKFNQLIDVPGHAMQQFFSQMPLLKTEMDRWLKKKQTIIVMVQDKERLDKV
SQTLDDFEIPSIMTTLDSLQLGKVQVVEGNLQAGFELPMANLVVVTEHEMFNKVTKKRPK
RQTLANAERLKSYQDLKPGDYVVHVNHGIGQFIGMETLEVDSKHQDYMTISYRDEAKLFI
PVTQLNMVQKYVSSESKSPRINKLGGTEWTKTKNKVAAKIEDIADDLVALYAEREAEVGF
QFSKDNDYQMEFENAFPYSETEDQIRSSNEIKHDMEQKKPMDRLLIGDVGFGKTEVALRA
AFKAIQDNKQVALLVPTTVLAQQHYETMINRFEGFPVEIGILSRFRTKKQLKETTDKMAS
GALDIVVGTHRILSKDIQFADLGLLIVDEEQRFGVKHKERLKEFKSQVDVLTLTATPIPR
TLNMSMLGVRDLSVIETAPLNRYPIQTYVMEQNGGTIRDGIQRELQRGGQVFYLHNRVED
IEKVVSEIEIMVPEASVAYIHGQMTENQLENVLYDFIQGVYDVLVTTTIIETGVDISNAN
TLFVENADHMGLAQLYQLRGRVGRSSRIAYAYFMYKPNKVLTEVSEKRLEAIKDFTELGS
GFKIAMRDLSIRGAGNLLGRQQHGFIDSVGYDLYTQMLTEAVNKKQGKKAEPKSDSEIDI
NIEAYLPSSYIDDQRQKIEIYKRIRQLDNYDQYLEVQGDLIDRFGEFPTEVNNLMEIGLL
KLFADKALVDKIKKDKDQLIVSVSEKGTTLLGTEAIFKALSATKLKASLKPQGKQMRVIL
VIQPKMTETDWLIELQNFVQALSESVGSVTAAN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagcaatgatgcagactgttcctggtgtagataactggctaacaaatatt
gaacctaatacaagacaattgttaactggactaacgggttcagctaaaacattgatgtta
gctactatttttaaagataaaaaaagatctatgttggttgtgacagataatttatttcat
gcaacacaattaaatgaagatttaactaactttattgatgaagaagatgtgcttacattc
ccagttgaagaattattagctgcagaactggcaacaagttcaccagaatctaaaagtgaa
cgtgtccaaacgcttcaagccctattagaagggacaccaaagattgttgtgacatcaatc
tcggggttacgacgttttctagcacctgtttcgacatggaaacaagcaacgttaaactta
gctgttggaaaagatattgatttgaaagccacggaaactcaactctttacgatgggctat
caacgtcaaaagttggttgaacgtcctggggattttgctgtacgtggttctatcttggat
atttacccattaaccgtagaaaatccaattagactagatttatttgacacggaaatagat
tcattacgttattttgatgtgactaatcaacgaagtttagagaatgtggaccagattcaa
attatacccgcgactgattttattgcgactgatactatgttatttgaagctagtcaaaca
ttaaaaaaagcgtatggtgttgaatataagcgattagataatgatgatcaagagcgatta
gaatcaaatattatgccacttatgagtgattttgaaaaaggtcgtttggctccggaacat
ttattatttagcgatattatttatcaaggtaaaacaagtttgttagattacttgggtagc
aatggtttagttgtaatggacgattatccaagattattagaagctgagaagacgcttagg
ctagatgaagataactggatggcagataagttaaaaacacatcaagttttgtctacaagt
gtttttggatttgaattacgagatttgttgaaaaatgaatcacatgctgaattatttctg
gcgcattttcaaaaaggaatgggtcatctaaaatttaaccaattgattgatgtaccaggg
catgccatgcaacaattttttagccaaatgccattattaaaaacagaaatggatcgttgg
ttaaaaaagaaacagactattattgttatggttcaagataaagaacgacttgataaagtt
tcacaaaccttggatgattttgagattccttctatcatgacgactttggatagcctacag
ttggggaaagttcaggtagtagaaggcaacttacaagctggatttgaattgccaatggct
aacttagttgttgtgacagaacatgagatgtttaacaaagtcacaaaaaaacgtccaaaa
cgccaaactttagcgaatgcagaacgacttaaaagctatcaagatttaaaaccaggagac
tatgtggtccatgttaatcatggtattggacagtttatcggaatggaaacattagaagtc
gatagtaagcatcaagattatatgacaatttcttatcgggatgaagctaaattatttatt
ccagtgacccaattaaacatggttcaaaagtatgtttcttctgaatctaagtcgcctaga
attaacaaattaggtggtactgaatggaccaaaacaaagaataaagttgctgctaaaatt
gaagacattgcggatgatttagttgcattgtatgctgaacgtgaagcagaagttggattt
caattttcaaaggacaacgattatcagatggaatttgaaaacgcatttccatactctgaa
actgaagatcaaattagaagttcaaatgaaattaagcatgatatggaacaaaagaaacca
atggatcgtttactgattggtgatgttggttttggaaaaacagaagttgcgctgcgtgcc
gcttttaaagccattcaagataataaacaggttgctttattagtgcctacaacggtgtta
gcacaacaacattacgaaacaatgattaatcgattcgaaggattcccagttgaaatcggg
attttatctcgttttagaacaaagaaacaacttaaagaaacaactgataagatggctagc
ggcgcgttagatattgtcgttgggacacatcgaattttatcaaaagatattcaatttgcc
gatttaggattattaattgttgatgaagagcaacgttttggtgtgaaacataaagaacga
ctaaaagagtttaagtctcaagttgatgtcttaacattaacggcaacgccaatcccaagg
acactaaatatgtcgatgcttggggttcgcgatttatcagtaattgaaacggcaccattg
aaccgttacccaattcaaacttatgtaatggaacaaaatggtggaactattcgagatggg
atacaacgtgaacttcaacgtggtggacaagttttttatttgcataatcgagttgaagat
attgaaaaagtagtttcagaaattgagattatggttcctgaagccagtgttgcgtatatc
catgggcaaatgactgaaaaccaattagaaaatgtcttgtatgatttcatccaaggtgtt
tatgatgtgttagtaacgacgacaattattgaaacgggtgtagatatttctaatgctaat
acattatttgtcgaaaatgctgaccacatgggattggcacaattgtaccagttacgtggt
cgtgttggccgtagtagtcgaattgcgtatgcctactttatgtataaacctaataaagtt
ttgactgaagtgagtgaaaaacgcttagaagcaatcaaagacttcaccgaattgggttct
ggatttaaaattgctatgcgagatttatctattcgtggagcaggaaatctattgggtcga
caacaacatggcttcattgattctgttggatatgatttatatacacagatgttgacggag
gctgtgaataaaaaacaaggtaaaaaagctgagcctaaatcagattctgaaattgacatt
aatattgaagcttatttaccatcatcttacattgatgatcagcgtcaaaaaattgaaatt
tataaacgtattcgacaacttgataattatgatcaatatttagaagtacaaggtgattta
attgatcgtttcggcgaatttccaactgaagtgaataacttaatggaaattggcttactt
aaattatttgccgataaggcattagttgataaaattaaaaaagataaagatcagttaatt
gtttctgtttcagaaaaaggaacgactttgctgggtacggaagcaattttcaaggcatta
tcagcgacaaaattaaaagcatcattaaaaccacagggcaaacaaatgcgtgtgattcta
gtgattcaacctaagatgactgaaactgactggttgattgaattacaaaactttgttcaa
gcgttaagcgaatccgttggatcagtaactgcagctaactaa
DBGET
integrated database retrieval system
