Dellaglioa kimchii: ACE83Q_04785
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Entry
ACE83Q_04785 CDS
T11222
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dki Dellaglioa kimchii
Pathway
dki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE83Q_04785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dki03019
]
ACE83Q_04785
03009 Ribosome biogenesis [BR:
dki03009
]
ACE83Q_04785
Enzymes [BR:
dki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACE83Q_04785
Messenger RNA biogenesis [BR:
dki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE83Q_04785
Ribosome biogenesis [BR:
dki03009
]
Prokaryotic type
rRNA helicases
ACE83Q_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
NAT10_TcmA_helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XLP63010
LinkDB
All DBs
Position
complement(939640..941259)
Genome browser
AA seq
539 aa
AA seq
DB search
MKFTELGLSDELLKAVQRSGFEEATPIQSETIPMALEGKDVIGQAQTGTGKTAAFGLPIL
DTIDTTKDEVQALIISPTRELAIQTQEELYRLGKEKHAKVQVVYGGSDIRRQIKSLNRAP
QILVGTPGRLLDHIRRRTVKLGNVKTLVLDEADEMLDMGFVEDIESILTTVPDERQTLLF
SATMPTAIRRIGERFMTDPTLVTVKAKELTTDLVDQFYVISKDFEKFDIMTRMYDAQNPT
QTIVFGRTKRRVDELAKGFEMRGYNAKGIHGDLSQQRRMSILREFKSGKLDILVATDVAA
RGLDISGVTHVFNYDIPQDPESYVHRIGRTGRAGHKGTSLTFVSPNEMDYLRQIEKLTKK
RMVALTPPTDDEAFAGQIETAIADVTALVNKTDTKKYAKQATELMAKFDVADLVAALLSD
VIKNDSSQVPVKITPERPLPRRKGGGGGGNNRRSGNGGGNRRGGNGGGYQGNRNGGGNRS
NGGSSDRRNGSSDRRSNSGSSDRRSNGNGGGGYKGNRSNDNRSNGSSAPKRNFTIRTKD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaattaggactatccgatgaactactaaaggccgttcaacgcagcggt
tttgaagaagcaacacctatccaatctgaaacaattccaatggctttagaaggaaaagat
gttattggacaagcacaaacaggtactggtaaaactgctgcatttggtttaccaatctta
gatacaattgatacaacaaaagatgaagttcaagcacttatcatctcaccaacacgtgaa
cttgctattcaaacgcaagaagaactttaccgtttaggtaaagaaaaacatgctaaagtt
caagttgtttatggtgggtctgatattcgtcgtcaaatcaagagtcttaatcgcgcacct
caaattttagttggaacaccaggacgtttattagatcatattcgtcgtcgtactgttaaa
ttaggtaatgttaaaactttagttttagatgaagctgatgaaatgttagatatgggattc
gttgaagatatcgaaagtatcttaacaactgttcctgacgaacgtcaaacattgttattc
tctgctacaatgccaactgctattcgccgtattggtgaaagatttatgacagatccaact
ttggtaactgttaaggcaaaagaattaacaactgacttagttgatcaattctacgtaatc
tcaaaagatttcgaaaaatttgatatcatgacacgtatgtatgatgctcaaaacccaaca
caaacaatcgtgtttggtcgtacaaaacgtcgtgttgatgaattagctaaaggattcgaa
atgcgcggatataacgctaaaggaatccatggtgatttatcacaacaacgtcgtatgagt
attttacgtgaatttaaatcaggtaaacttgatattttagtagctactgatgttgctgct
cgtggtttagatatttctggggttacccatgtctttaactatgatattcctcaagatcct
gaaagttatgtccatcgtattggccgtacaggccgtgccggacataaaggtacttcattg
acatttgtttcaccaaatgaaatggattacttacgtcaaatcgaaaaattaactaagaaa
cgtatggtggctttaacaccacctacagatgatgaagcatttgctggtcaaattgaaaca
gcaatcgctgacgttactgctttagttaacaaaactgatactaaaaaatatgcaaaacaa
gccactgaattaatggctaaatttgatgttgctgatttagttgcagcattgcttagtgat
gttattaaaaatgattcatcacaagtacctgttaagattacaccagaacgcccattacct
agacgtaagggtggcggtggtggcggaaacaaccgtcgtagcggcaatggcggtggaaat
cgtcgtggtggcaacggtggtggttaccaaggcaaccgtaatggtggcggaaaccgtagt
aacggtggaagttcagatcgtcgtaacggaagtagcgatcgccgtagtaatagtggtagc
tcagaccgtcgtagcaatggtaatggtggcggaggttacaaaggtaaccgctcgaacgat
aatcgttcaaacggaagtagcgcaccaaaacgtaacttcacaatcagaacaaaagattaa
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