Dokdonella koreensis: I596_549
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Entry
I596_549 CDS
T04377
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dko
Dokdonella koreensis
Pathway
dko00300
Lysine biosynthesis
dko00550
Peptidoglycan biosynthesis
dko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I596_549
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I596_549
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dko01011
]
I596_549
Enzymes [BR:
dko01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
I596_549
Peptidoglycan biosynthesis and degradation proteins [BR:
dko01011
]
Precursor biosynthesis
Amino acid ligase
I596_549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
DUF4440
Motif
Other DBs
NCBI-ProteinID:
ANB16586
UniProt:
A0A167GI64
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All DBs
Position
658655..660139
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AA seq
494 aa
AA seq
DB search
MSRQHPTTLRDLLAGIVDAGDVVIGGLSEDSRRIAAGDAFVALRGGQVHGLVHAPAALAR
GAAAILAEPPAPAGAPPLPSAAPLVWIDDLRQRLGTIAARFHGDPSRALRVIGVTGTNGK
TSTVQLLAQALAHAGRRSATIGTLGAGLHGAIQAGERTTPDAIAVQALLAEFRDAGATDV
AMEVSSHALDQGRVNAVVFQVAVFTNLTRDHLDYHGDMVAYGAAKAALFHWPELAAAVVN
IDDPFGRELAGGIGAATRRLTYGLDAPGADVGASAITTSGEGLAFHLRTPWGEGPVRTRL
LGRFNVANLLAVVACLGLAGVDFDGIVDALAALEPVAGRMSRLGGRHGAPLLVVDYAHTP
DALEKALTTLRAHCAGELVCLFGCGGERDAGKRPQMAAIAEALADRVVVTDDNPRGEDGD
AIVAAILAGFTDPQRVRVQRDRARAIAEAVQAARAGDVVLIAGKGHEPYQEVGGIRIPFD
DRAVAQAALEARPC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccagcatccgacaaccttgcgtgacctgctcgccggcatcgtcgatgccggc
gatgtcgtgatcggcggtctcagcgaggactcgcgccggatcgcggccggcgacgccttc
gtcgcgctgcgcggcgggcaggtgcacggcctggtccatgcgccggccgcgctggcccgg
ggcgcggcggcgatcctggccgagccgccggcaccggccggcgcgccgccgctgccgtcc
gccgcgcctctggtctggatcgatgacctgcgccagcggctcggtacgatcgcggcgcga
ttccacggcgatccgtcgcgggcgttgcgcgtgatcggcgtcaccggtaccaacggcaag
acctccaccgtgcagctgctcgcgcaggcgctggcccatgccggccgccgcagcgcgacg
atcggcacgctcggcgccggcctgcacggcgccatccaggccggcgagcggaccacgccc
gatgcgatcgcggtgcaggccctgctggccgagttccgcgatgccggcgcgaccgacgtg
gcgatggaggtgtcctcgcacgccctcgaccagggacgtgtcaatgcggtcgtgttccag
gtcgcggtcttcaccaacctgacgcgtgaccatctggactatcacggcgacatggtggcc
tacggcgcagccaaggccgcgctgttccactggccggagctggcggctgccgtcgtcaac
atcgacgatccgttcggccgcgaactggcgggcggcatcggtgcggcgacgcgccggctg
acctacggcctcgatgcgccgggggccgacgtcggtgccagcgcgatcacgacgtccggg
gaggggctggccttccacctgcgcacgccctggggcgaaggcccggtccgcacccgcctg
ctcggccgcttcaacgtcgccaacctgctcgccgtggtcgcctgcctgggactggcgggc
gtggacttcgacggcatcgtcgacgcactggcggccctggagccggtcgccggccgcatg
agccggctcggcgggcggcacggcgcgccgctgctggtcgtggactatgcacacaccccc
gatgcgctggagaaggcgctgaccacgctgcgcgcgcactgtgccggcgagctggtctgc
ctgttcggttgcggcggcgagcgcgacgccggcaagcggccgcagatggcggcgatcgcc
gaggcactggcggaccgcgtcgtcgtcaccgacgacaacccccggggcgaggatggcgat
gcgatcgtcgcggcgatcctcgccggcttcaccgatccgcaacgcgtccgcgtacagcgc
gatcgcgcgcgcgcgatcgccgaggcggtgcaggccgcccgggccggcgacgtggtgctg
atcgccggcaagggacacgagccctaccaggaagtgggcggcatccgcatccccttcgac
gaccgggccgtcgcccaggcagcactggaggcacggccatgctga
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