Dickeya lacustris: O1Q98_00605
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Entry
O1Q98_00605 CDS
T08984
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dlc03009
]
O1Q98_00605 (rlmC)
Enzymes [BR:
dlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
O1Q98_00605 (rlmC)
Ribosome biogenesis [BR:
dlc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
O1Q98_00605 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WFN57483
LinkDB
All DBs
Position
133925..135055
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AA seq
376 aa
AA seq
DB search
MQCARYHDGSCRSCQWLELDYPQQLIDKQKHLTALLGDYPVQQWRDPVPSPESAFRNKAK
MVVSGSVERPLFGTLHRDGTAVDLCDCPLYPDSFAPVFAVLKTFIARAGLTPYNVARRRG
ELKYLLLTQSQLSGRFMLRFVLRSQAKVPALNAALPWLMAQLPQLSVISANIQPIHQAIL
EGEEEIALTPEQALEECFNQVPLYIRPQSFFQTNPHVAAALYDTAKQWVAALPVRSMWDL
FCGVGGFGLHCAGPQTALIGIEISPEAIACAQRSAAQLGLENVSFAALDSTRFAVGETHT
PDLVMVNPPRRGIGEVLCDSLSRMAPPYLLYSSCNALTMAQDIARLPEYQIAQAQLFDMF
PHTAHYEVLVLLQRRA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgcccgttatcacgatggctcctgccgttcttgccaatggctggagctggat
taccctcagcaactcattgacaaacaaaaacatctgacagcgctgctaggggattacccg
gtacaacagtggcgcgatcctgtgccatcgccagagtcggcgtttcgcaataaagctaaa
atggtggtgagcggcagcgtagagcgtccgttgtttggcacgttacatcgtgatggtacg
gcggtcgatctctgcgattgcccgctctatccagacagctttgcgccggtgtttgcggtg
ctaaaaacctttatcgcacgtgccggtttaacgccctataacgtggcgcgccgccggggt
gagttgaagtatttgctgctcacgcaaagccaactgagcgggcgttttatgctgcgtttc
gtgctgcgctcacaggccaaagtaccggcgctgaatgccgcattgccgtggctgatggcg
caattaccgcagttgtctgttatctcggccaatattcagcctatccaccaggctattctg
gaaggggaggaggagattgcgttaacgccggaacaggcgctcgaagagtgttttaatcag
gtgccgctgtatattcggccccaaagtttttttcagactaacccgcacgtggctgccgcc
ttgtatgacacggcaaagcagtgggtggcggcattaccggtgcgcagcatgtgggatctg
ttttgcggcgtcggcggtttcggcttgcactgcgcaggcccgcaaacggcgttaatcggt
attgaaatcagcccggaagcgattgcttgcgcacaacgctctgcagcgcaactggggttg
gaaaacgtcagttttgcggcgctggattctacccgttttgccgttggcgaaacgcacacg
ccggatctggtgatggttaatccgccccggcgcggtattggcgaggtgttgtgtgactct
ctgagccggatggcgccgccgtatctgctttattcgagctgtaatgcgctgacgatggcg
caagatattgcgcgcctgcccgaataccagatagctcaagctcaattattcgatatgttc
ccgcatactgcgcactatgaagtgctggtgttgctgcaacggcgagcctga
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