Dickeya lacustris: O1Q98_14670
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Entry
O1Q98_14670 CDS
T08984
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00540
Lipopolysaccharide biosynthesis
dlc01100
Metabolic pathways
Module
dlc_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
O1Q98_14670 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dlc01005
]
O1Q98_14670 (lpxC)
Enzymes [BR:
dlc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
O1Q98_14670 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
dlc01005
]
Lipid A
O1Q98_14670 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WFN57652
LinkDB
All DBs
Position
3234438..3235355
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AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVDAPEIPIMDGSASPFVYLLLDAGI
EELNCAKKFLRLKQAVRVEDGDKWAELKPFNGFSLDFTIDFNHPVIDAGSQRFKLNFSAD
AFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFDDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEFVTFEDEAEMPLAFKAP
SAVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacgtacactaaaacgtatcgtacaggcgacaggggtcgggcttcatacc
ggcaagaaagtcaccctgactatgcgtcctgcaccggcaaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgattttccggctgatgccaaatccgtgcgtgatacc
atgctctgtacttgcctggttaatgagcatgacgtgcgtatttcgaccgtggagcatctg
aatgcggctctggcagggttgggtatcgataatattgtgattgaagtcgatgcgccggaa
atcccgattatggatggcagcgccagtccttttgtttacctgctattggatgcgggtatc
gaagagctgaattgtgctaaaaaattccttcgcctcaagcaagctgtgcgggtggaagac
ggcgataaatgggccgaactgaaaccattcaatggttttagcctggatttcaccattgat
ttcaatcacccggtgattgatgccggttcacagcgtttcaagctgaatttctccgctgat
gcgtttgtgcgccagatcagccgcgctcgtacctttggctttatgcgcgatattgaatat
ttacagtcgcgtggtttgtgtctgggtggcagtttcgattgcgctattgtggtggatgac
taccgtgtattgaatgaagatggtttgcgttttgatgatgaatttgttcgtcacaaaatg
ctggatgccattggtgatctgttcatgtgcggccacaacattatcggtgcattcaccgct
ttcaaatctggccatgcgctgaataacaaattgctgcaagctgtactggctaaacaggaa
gcgtgggaattcgtcacctttgaagacgaagcggaaatgccattggcattcaaagcccct
tctgctgtgctggcgtaa
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