Delphinapterus leucas (beluga whale): 111163067
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Entry
111163067 CDS
T05885
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
dle
Delphinapterus leucas (beluga whale)
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dle03036
]
111163067 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
dle03400
]
111163067 (SMCHD1)
Chromosome and associated proteins [BR:
dle03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111163067 (SMCHD1)
DNA repair and recombination proteins [BR:
dle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
111163067 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
HATPase_c_3
HATPase_c
OpuAC
IFT20
DUF4763
Motif
Other DBs
NCBI-GeneID:
111163067
NCBI-ProteinID:
XP_022407216
UniProt:
A0A2Y9LET0
LinkDB
All DBs
Position
Unknown
AA seq
2000 aa
AA seq
DB search
MAAADDGGPSVGTGEGDGGDGGDGHRTVYLFDRREKESELGDRALQVTERSDFAAFRASV
CQTLGISPEEKFVITTTSRKEITCDNFDEAVKDGVTLYLLQSVSQLLLTATKERIDFLPH
YDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGVRRIQIKLLFDETQGKPAV
AVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPLPVPRSLNSDISYFGVGGK
QAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITN
DDERFLHHLISEEKEKDSFTAVVITGVQPEHIQYLKNYFLLWTRQLAHIYHYYIHGPKGN
EKRTSKEVGPFNNIDIEISMFEKGKTPKIINLREIQDDMQTLYINTAADSFEFKAHVEGD
GVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRL
IPYTSVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNT
LFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWATYS
AIEWDGKIYKAGQLVKTIKTLPLFYGSIVKFFLYGDHDGEVYATGGEVQIAMEPQALYDE
IKTVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRI
EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSPNGNKEIISHISQHGGKWPYWFKKME
NIQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFLFGLLDPPFRVGVP
FNIPLEFQDEFGHTSQLSTDIQPVFEASGLSLHYEEITNGPNCVIRGVTAKGPVNSCQGK
NFNLKVIFPGLKEDSQILKIRLLPGPPHRLKVKPDSEILVIENGTAFPFQVEVLDESDNI
TAQPKLIVHCKFSGAPNLPLYVVDCSSSGTSILSGPAIQVQNIKKDQTLKAKIEIPSCKD
VAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMHNLIFQMYDEGERE
IHITSALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFT
VRPLPDEPKHLKCELKGGKTVQMGQELQGEIVIIVTDQYGNQIQAFSPSSLSSLGIAGIG
LDSSHLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLV
DWPELKESIPVINGRELQNPLIVQLCDQWDNPALVPQVKISLIKANNLKLTPSNQQHKTD
ERGRANLGVFSVYAPRGEHIMQVKAIYNKNTIEGPIIKLMILPDPEKPIRLNVKYDKDAS
FLAGGIFTDFMITVISEDDSIIKNINPARISMKMWKLSNSGNRPPANAEIFSCNKIKDND
KEDGCFYFRDKAIPNKVGTYCIQFGFMMDKANILNSEQIIVDVLPNQPVKLVPEIQPATP
AVSNVRSVASRTLVKDLYLRITDDYNNHTGIDLVGTVMATIKGSNEEDDTPLFIGKVRTL
EFPFVKGSAEITSLVLAENSPGRDSTEYFIVFEPQLPGLSRTLEPYILPFMFYNDVKKQQ
QMAALTKEKDQLSKSIIMYRSLFDASKQLLDEMKCQVEEAKLKEAQLRNELKTHNIDIPT
TQQMPHIEALLKKKVSEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMVI
SWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHYRNGKLYF
KPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLT
RDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRTAVCRLGS
VNKDLNGQLEYLHTPDMKKKKQELDEQEKNLKLIEQKLGMTPTRKCNDSLRHPMTDCPVP
PKRMRREVTRQNRIITKTDV
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggacgacggcgggccctcggtggggaccggagagggcgacggcggcgac
ggcggcgacggccacaggacggtgtacttgtttgaccggcgcgagaaggagtcggagctc
ggggaccgggcgctgcaggtcacggagcgctcggactttgcggcgttccgcgcttcagtg
tgtcagacacttggcatttcacctgaagaaaaatttgttattacaacaacaagtaggaaa
gaaattacctgtgataattttgatgaagctgttaaagatggagtcactctgtacctgcta
cagtcagtcagtcagttactactaacagctacaaaagaacgaattgacttcctacctcac
tatgacacattggttaaaagtggcatgtatgaatattatgcaagtgaaggacaaaatcct
ttaccatttgctcttgcagaattaattgataattcattgtctgccacgtctcgtaacact
ggtgttagaagaatacagatcaaattgctttttgatgaaacacaaggaaaacctgccgtt
gcagtgatagataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtat
aggttgtcaaaatttacaaggcaaggtgactttgaaagtgatcattcaggatatgttcga
ccactaccagtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaag
caggctgttttctttgttggacaatcagccagaatgataagcaaacctgcagattcccag
gatgttcatgaacttgtactttctaaagaagattttgagaagaaggagaaaaataaagag
gcaatatatagcggatatattagaaacagaaagccgtctgattctgttcacattacaaat
gatgatgaaagatttctacatcatcttatctcagaggagaaggaaaaagatagctttact
gctgtggttatcacaggggtacaaccagaacacatacagtacttgaaaaattatttcctt
ctttggacgagacagttagcgcatatttatcattactatattcatggcccaaaagggaat
gaaaaacgtacatcaaaggaagttggacctttcaacaacattgatattgaaatttctatg
tttgaaaaggggaagacacctaagattatcaacctaagggaaatacaagatgacatgcag
acgttgtatataaatacagcagccgatagttttgagttcaaggctcatgttgaaggagat
ggtgtagtggaagggattatccgatatcacccttttttatatgatagagaaacgtatcct
gatgatccatgctttccatcaaaattaaaagatgaagatgatgatgatgactgtttcata
cttgagaaagcagcaagagggaaaagacctatttttgaatgtttttggaatggacgacta
ataccatatacatctgttgaagactttgactggtgtactcctcctaagaagagagggctt
gcaccgattgagtgctacaataggatatctggtgcattattcactaatgacaaattccag
gtcagcacaaataaactgacctttatggatcttgagctaaaattgaaagataagaacacc
ctttttacaaggattttaaatggacaggagcagcgaatgaaaattgacagagaatttgct
ttatggctgaaggactgtcatgaaaagtatgacaaacaaataaaatttacactttttaaa
ggaataattacacgtcctgatcttccttctaaaaagcagggcccctgggcgacttattca
gcaatagaatgggatggaaaaatatacaaagcaggacagctggtcaagacaatcaagaca
cttcctctcttttatggaagcattgtaaaattttttctttatggtgatcatgatggagaa
gtatatgctacaggaggagaggttcaaattgcaatggaacctcaggcactgtatgatgaa
ataaaaactgtgccaattgcaaagctggataggacagttgctgagaaagctgtgaaaaaa
tatgtagaagatgaaatggcaaggctccctgatagattgtcagtaacttggcctgaagga
gatgaattattgccaaatgagattaggcctgctggaacccccattggtgcattaagaatt
gaaatattgaataaaaagggggaagcaatgcaaaagcttccaggaacaagtcatggaggg
tcaaagaaactcctggttgagctcaaagttatactacactctccaaatggaaataaagaa
atcatttcacatattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaa
aatattcaaaagttggggaattatacattgaaattacaagttgtactgaatgaaagtaat
gcagacacttatgcaggaagaccactaccatctaaagcaattaaattttctgtcaaagag
ggtaaaccagagaaatttttatttggtcttttggatcctccttttcgtgttggagtccca
ttcaatatccctctggagtttcaggatgaatttggtcatactagtcaactgtcaactgat
attcagccagtttttgaagcaagtggtttatctttacattatgaagaaataaccaatggc
ccaaattgtgtcattcgaggtgttacagctaagggccctgtaaactcttgtcaaggcaag
aattttaatctgaaggttatttttccgggtttaaaagaagactcacagattctgaaaatt
agattactgccaggtccccctcatcgattgaaagtgaaacctgattctgaaattttagtt
atagaaaatggaacagctttcccatttcaggtagaagttttggatgaatcagacaatata
acagcacaaccaaaattgattgttcattgtaagttttcaggtgctccaaaccttccactc
tatgttgtggattgcagtagttctggaaccagtattttgtcaggaccagcaattcaagtt
cagaatatcaaaaaagaccagacgcttaaagcaaaaattgaaatacctagttgtaaagat
gtggcacctgtggagaagacgattaagttgcttcccagtagccatgttgcaagattacag
atattcagtgtagaaggacaaaaggcaatccagatcaaacatcaggatgaggttaattgg
atagcaggagatattatgcataaccttatttttcaaatgtatgatgaaggagaaagagaa
atccacataacatcagctttagcagagaaaattaaagttaactggactcctgagattaac
aaagagcacttactacagggtctgcttcctgatgtacaagtaccaacatctgtaaaagat
atgcgctattgccaggtttcattccaagatgatcatgtgtctttggaaagtgcatttaca
gtaagaccacttcctgatgaacctaaacatctaaaatgtgaattaaaaggaggaaaaact
gtacagatgggccaagagcttcaaggagaaatagttataatagttacagatcagtatgga
aatcagattcaagcattttcaccaagttctctatcttccttgggaattgctgggattgga
cttgatagctcacatttgaaaactacttttcaggaaaatacacaaagtataagtgtgaga
ggcatcaaatttattccaggtccccctggaaataaggatctttgttttacgtggcgtgag
ttttctgactttattcgagtgcagctaatttctgggccaccagctaaacttctccttgta
gactggccagagttaaaggagtccattccagtgattaacggaagagaattacagaatcct
ctcattgttcaactttgtgatcagtgggataatccagcacttgtgccacaggttaaaata
agccttataaaagctaacaatttaaagctcactccttcaaaccaacagcataaaaccgat
gaaaggggcagggctaatttgggagtgttcagtgtttatgcccctagaggagaacatatt
atgcaggttaaagccatttataacaagaataccatagaaggacctataattaagttaatg
attcttccagaccctgaaaaacccattcgtctcaatgttaaatatgacaaagatgcttcc
tttttagcagggggtattttcactgattttatgattactgttatttctgaagatgacagt
atcattaaaaatattaatccagcacgtatttccatgaaaatgtggaaactgtcaaacagt
gggaaccgaccaccagcaaatgcagaaatatttagttgtaataaaataaaggataatgac
aaggaagatggctgcttctacttcagggataaagcaattcctaacaaagtggggacatat
tgtatccagtttggttttatgatggataaagcaaatatccttaacagtgagcagattata
gtggatgttctacctaatcaacctgtgaagttagttcctgaaattcagccagctacacca
gctgtttcaaatgttcgctcagttgccagtaggaccttggtcaaagatttatatcttcgt
atcacggatgactacaacaatcatactggaattgatttggttggcactgtaatggctacc
atcaaaggctctaatgaggaagatgacaccccactctttattgggaaagttagaacactt
gaatttccctttgtgaaaggttcagctgaaatcacgagtctagttctggcagaaaatagt
cctggaagggatagcactgagtattttattgtgtttgagcctcagctaccaggtttatca
agaacattagaaccatatatcctaccatttatgttttacaatgatgttaagaagcagcaa
caaatggcagcacttacaaaagaaaaggaccaattatctaagtctattataatgtataga
agtttatttgatgccagcaaacagcttcttgatgagatgaagtgccaagttgaagaagca
aaattaaaagaggcccagttgcgaaatgaactaaaaacacacaatattgacattcctaca
acacaacagatgccacacattgaagcacttttgaagaaaaaggtatcagaacaggaagaa
ctaaagaaaaaacccagaagatcatgtactcttccaaactatactaaaggcagtggagat
gttttaggaaagattgcacacctggcacaaattgaagatgatagagccgcaatggttatt
tcttggcatctggcaagtgacatggactgtgtggtcaccctgaccactgatgctgcacgt
cgtatctatgacgaaacccaaggtcgtcagcaggtgttgccccttgattctatttataag
aagactcttccagattggaaaagacctctgcctcattaccgaaatggaaaattgtatttt
aaacccattggagatcctgtctttgcccgagatttgttaacgtttccagataatgtagaa
cattgtgaaacagtgtttggtatgctgttaggagacaccattattttggataatttggat
gctgctaatcattatagaaaagaggttgttaaaattacacactgtcctacactgctgacc
agagatggagatcgcattcgaagtaatggaaagtttgggggccttcagaataaagctcct
ccaatggataaacttcggggaatggtctttggagctccagtaccaaaacagtgcctgatc
ttaggggaacaaatagatcttcttcagcagtaccgcactgctgtgtgcaggttgggcagt
gtgaacaaggacctcaacgggcagttggaataccttcacactccggatatgaagaagaaa
aaacaggaacttgatgaacaagagaagaatctcaaactgatagagcaaaaactcggtatg
actcccacacgtaagtgtaatgactcactgcgtcatccaatgacagactgtccagttcct
cctaagagaatgagaagagaagttacaagacaaaataggattataaccaaaacagatgtg
tga
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