Desulfonema limicola: dnl_04700
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Entry
dnl_04700 CDS
T07101
Symbol
thiC2
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K22466
5-hydroxybenzimidazole synthase [EC:
4.1.99.23
]
Organism
dli
Desulfonema limicola
Pathway
dli00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
dnl_04700 (thiC2)
Enzymes [BR:
dli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.23 5-hydroxybenzimidazole synthase
dnl_04700 (thiC2)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
DUF4368
Motif
Other DBs
NCBI-ProteinID:
QTA78250
UniProt:
A0A975B3R2
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All DBs
Position
520393..521721
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AA seq
442 aa
AA seq
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MKTQIELARQGIISSQMKTIAKDEGLKPGFICKKVAAGEIVIPINPGRKTQKTVGIGTGL
RTKVNASIGTSSDIYDIDLEVRKARVIQEEKADTIMELSAGGNLDKVRRAVIDSVDLPVG
NVPLYQAFHDTAKKYKNPNKLDPEFLFDLIEKQLEDGISFMAVHCGINQFSIERLRKQGY
RYGGLVSKGGTFMVSWMEYNKKENPLYEQFDRVCRLMKKYDAVLSLGNGIRAGAIHDSHD
RAQMAEMIINCELAELGREMGCQMMVEGPGHVPLDEIQGNIMLEKRMSGNAPYYVLGPLP
CDIGAGYDHITAAIGAANSARYGADLICYITPAEHLALPNVEDVREGVRVTRLAVHIGDV
AKYPDRREREKQVSLARRDMRWEDHMRLLMFPDKAKEIRASRVPENEKTCTMCGDFCAME
RGFSLFENNIKGDKMSVCGLAN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacacagattgagcttgccagacagggaattatcagttcccagatgaaaacaatt
gcaaaagatgaaggattgaagccaggatttatctgcaaaaaggttgcagcaggagagatt
gttattcccattaatccaggccgcaaaacccagaaaacagtgggtattggaacagggctg
cgtaccaaggttaatgcttctattggaacatcttcagatatttatgatattgatcttgag
gttagaaaagccagggtaatacaggaggaaaaagctgataccattatggagctttcagca
ggcggaaacctggataaggtacgcagagcagttattgacagtgttgatcttcctgtgggt
aatgttcctctttatcaggcatttcatgatactgcaaaaaaatataaaaatcctaataaa
cttgatcctgaatttttatttgatcttattgaaaaacagcttgaagacggcatatctttt
atggctgtccactgcggtataaaccagttcagtattgagcggcttagaaaacagggatac
cgctacggcggcctggtatccaaagggggtacatttatggtttcctggatggagtataat
aaaaaggaaaatcccctgtatgaacagtttgaccgtgtatgcaggcttatgaaaaaatat
gatgctgttctttctctgggtaacggcatcagggcaggagccattcatgacagtcacgac
cgggcccagatggctgagatgattattaattgtgaacttgcagaactgggcagggaaatg
ggctgccagatgatggtggaaggccctggacatgtgcccttagatgagattcaaggaaat
attatgcttgaaaagcgcatgagcggcaatgccccctattatgtacttggtcccctgcca
tgtgatattggagcaggatacgatcatattacagcagccattggtgctgctaattctgcc
cgttatggagctgatcttatctgttatattaccccggccgagcatctggctctgccaaat
gtagaagatgttcgtgaaggtgtcagggttaccaggcttgcagttcatattggtgatgtg
gctaaatatcctgacagacgggaacgtgaaaaacaggtttcccttgcaagaagggatatg
cgctgggaagatcatatgcgccttctcatgtttcctgataaggcaaaggagattcgtgcc
agcagggtgcctgaaaatgaaaaaacctgtacaatgtgcggagatttttgtgctatggag
cgcggcttttctttatttgaaaacaatataaaaggggataaaatgtctgtctgtggactg
gcaaattaa
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