Desulfonema limicola: dnl_31560
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Entry
dnl_31560 CDS
T07101
Name
(GenBank) Efflux transporter, RND family
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dli
Desulfonema limicola
Pathway
dli01501
beta-Lactam resistance
dli01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
dnl_31560
01503 Cationic antimicrobial peptide (CAMP) resistance
dnl_31560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dli03036
]
dnl_31560
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_31560
01504 Antimicrobial resistance genes [BR:
dli01504
]
dnl_31560
Chromosome and associated proteins [BR:
dli03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
dnl_31560
Transporters [BR:
dli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
dnl_31560
Antimicrobial resistance genes [BR:
dli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
dnl_31560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
YknX_C
Beta-barrel_RND_2
BSH_YknX
BSH_CusB
BSH_CzcB
Biotin_lipoyl
HH_MFP_RND
Bflower_3
BSH_LcnD
CzcB_C
RND-MFP_C
Beta-barrel_AprE
TPR_MLP1_2
CC_Bre1
Motif
Other DBs
NCBI-ProteinID:
QTA80843
UniProt:
A0A975B8T7
LinkDB
All DBs
Position
3359192..3360364
Genome browser
AA seq
390 aa
AA seq
DB search
MFKKVFSFMWIFLGMVLLMSGCGDKIEPGNTESAHLPPVKTEVAQAEISSQPFIYEAIGN
ITAQTSSTLSGKIMGTVKAVNVREGDSVKQGDILVVLDERQVTAGLQQSQAGLSEAKRAE
SAAMSARNAAKAGAELAAATYKRYKNLLKSESATRQEFEEVEARHRQAQAALAQAESMVA
AARSRVQQAEAFVSGASISKKDAHVAAPYDGIVTAKMINAGDLASPGTPFLTLEKTGGFQ
AELVVPEHHIQAVRIEQTLEVTIPSLENSPSFTGIVQTIAPAADQKSRSFMLKVNLPESP
VIRSGMFARVLIPVGERGIMLMPKSALVIQGQLTGYFAVDDKQTARFRLMRTGRVFDDNI
EIISGVKPGTRYVVSPPLQLKDGMKVEAAS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagtgttttcatttatgtggattttcctgggaatggttttacttatgtct
gggtgtggagataaaattgaacctggaaacactgaatctgcccatttacccccggtaaaa
accgaggtagcccaggcggaaataagcagccagccctttatttatgaagctattggaaac
ataactgcccagacatccagcaccctgtcaggtaaaattatgggcacagttaaagctgtt
aatgttcgtgaaggtgattcagttaaacaaggagatatcctggtagtcctggatgagcgg
caggttacagccgggcttcagcagagccaggccgggctttctgaggcaaaaagggctgaa
tctgctgccatgtcagccagaaacgctgcaaaagccggtgctgaactggctgctgctaca
tacaaaagatataaaaaccttcttaaatccgaatctgcaaccaggcaggaatttgaagaa
gtggaagccagacaccgccaggcacaggcagccctggcacaggcagaatcaatggtggct
gctgcaagatcaagggttcagcaggctgaagcttttgtatcaggggcaagcatttcaaaa
aaagatgcccatgttgcagcaccttatgacggaattgttacagcaaaaatgattaatgca
ggagacctggcttcacctggaaccccgtttctgactttggaaaaaaccggtggttttcag
gctgaacttgtggttcctgaacatcatatccaggcagtccgcattgagcagacccttgag
gttaccataccttctttggaaaactcaccgtcattcaccggaattgtacaaaccattgca
cctgctgcagatcagaaaagccggtcttttatgctcaaggtaaacctgcccgagtctcct
gttatccgttcaggcatgtttgcccgtgtattaattccagtgggtgaaagaggaataatg
ctgatgccgaaatcagcactggtgattcaggggcagcttacaggttattttgctgttgac
gataaacaaacagcaagattcaggctcatgagaaccggcagggtatttgatgacaatata
gagataatctccggggtcaaacccggaacccgatatgtggtttccccgccccttcaatta
aaagacggcatgaaagtggaggctgcatcatga
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