Diospyros lotus (date-plum): 127795893
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Entry
127795893 CDS
T10632
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03420
Nucleotide excision repair
dlt04120
Ubiquitin mediated proteolysis
dlt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127795893
04120 Ubiquitin mediated proteolysis
127795893
09124 Replication and repair
03420 Nucleotide excision repair
127795893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127795893
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127795893
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
127795893
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127795893
Multi subunit type E3
SCF complex
Ring finger protein
127795893
Cul2 complex
127795893
Cul3 complex
127795893
Cul4 complex
127795893
Cul7 complex
127795893
Cul8 complex
127795893
Cul9 complex
127795893
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127795893
TCR (transcription coupled repair) factors
Cul4-CSA complex
127795893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
127795893
NCBI-ProteinID:
XP_052183826
LinkDB
All DBs
Position
2:10183568..10187664
Genome browser
AA seq
128 aa
AA seq
DB search
MASLDTDVTMVPVGEGGGPGGAGPSSSTASTSSSSSKKAKRFEIKKWNAVALWAWDIVVD
NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE
WEFQKYGH
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctcgacaccgacgtgacgatggttccggtgggtgagggcggtggtcccggc
ggtgctggcccctcgtcttccaccgcctccacatcttcttcctcatcgaagaaggccaag
cgattcgagatcaaaaagtggaacgccgttgctctctgggcttgggatatcgttgtggat
aattgtgcgatctgccgtaaccatatcatggatctctgcattgagtgccaagctaatcaa
gccagtgcaacaagcgaggaatgtactgttgcttggggggtttgcaatcatgcattccac
ttccactgcatcagccgatggctaaaaacacgtcaagtgtgtccactggataacagtgag
tgggaattccaaaagtatggacactag
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