Diospyros lotus (date-plum): 127801613
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Entry
127801613 CDS
T10632
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127801613
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127801613
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127801613
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
127801613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
Motif
Other DBs
NCBI-GeneID:
127801613
NCBI-ProteinID:
XP_052192848
LinkDB
All DBs
Position
1:45069712..45097400
Genome browser
AA seq
1610 aa
AA seq
DB search
MNKRPSSEGKSFGWPCKRLFTDYVENGDDDAPGVGKVYKFRVLLPNGTSLGLTIRDPEMD
LDLEEFVHLVKAEYFKTIRESGSPKPKRRVDWRSRNLCFVDAFDDVLGTRISFRKFQPNK
YHILRLHDGSGEAETYENMWDLTPDTEMLRELPHEYSFETALADLIDNSLQAVWSNSVDE
RRLISVDLTDDRILIFDTGPGMDGSEENSIAKWGKIGASLHRSSRGRGIGGKPPYLMPFF
GMFGYGGPIASMHLGRNALVSSKTKESKKVYSLRLERDTLLSSSNSEKRWTTEGGIRQLT
EDEITRSPQGSFTKVEIFDPKRKGLDIAQLQCKLKDIYFPYIQCDEISITGRTTMPIEFQ
VNGVDLAEIQGGEVAITNIHSCNGPEFVLQLHIIQSVMASSSARTRVSQEANARLKFVYF
PIVEGKENIDRILEKLETEGCGLSERFETFSRVSVRRLGRLLPDARWKLLPFMEPKLKVG
DKARILKQSLARVKCFIETDAGFNPTPSKTDLAQHHPYTTALKNFGGMPLEIEQEINLKI
YKDGKQQTLLQVEKMYQEWICQMHDRYDEEVECGDDEPVLVVNPSNKKRLGISSNILRVH
KVIRRKGASWVSGQKLKILKGACAGCHKNNVYATLEYILIEGFQGDAGGEARLICRPLAV
PIENGCALTLHDEHTSIDIRDSISLPISVIESGKCLTMEAGEWERVVEKNRQKLPYTIEI
LSGKHCQELGVAEGALPNNSTVYAGHVPPKEIVAVVHSASSSPASSSKNLNQKCIVKENL
EMGMQIKFRDIFKSDQDFIDLYSVYVSPSSRKGLYGLYIFSVGCKFAHIFQKAGVYIFSF
FLRGVNSMTCERRVDVKASSEVGRWGQINDGESLPYITWVGMSSPPISIACYDMYNNRMP
FACVPKVVIKIISGRMVLCKVHNMKLDLSPDRLTLTIKDALVVSTQLDKIRPHYEATLVI
SQSDELFPMSIPCEVLPGYLQSVTIQPKDLDKQLLPGQAIKELIFEMFDPYGNHVEEGLQ
VQFNVDGLCFRDHAGSTSTHKVDECGCINLSGLLEVTEGYGKKVSISVLFNEKIIFKKEF
QTEKRVLKTAFMVPKCCIAGSVLENIVFEIVNSEDEVDETIHDEESSGQSHTLIIKSGSL
DANDSATYSFCYGRCLVRSISLPQEEGMVNLIASHSRYPELHVTIKVHVVLEASQVEPDN
IQSLNLDGRGPPLHDLSVLKVPKLEQDGVHQQCSVGRLSFLCDSSTDKDVENLVVSILKD
LKELEMDVHKYGLEVGCHEEALKMLNVKKVEVEEEVSRLQGSLTWRESTMELIESKADSA
AAVICRLFREFHLQNRQHSFLKNVLGVVAFLGTVKSNELSRILAAYLGEDQMLAIVCNSY
AAADYLEKYEQDGNVDPAHDLYAIATALGRPVCGRYLVICLEDTRPYTGEVGTQGLSLPL
PTLPGGNTPPGFLGYAVNMINLGFHHMYTRTEAGHGLRETLFYCLFGELQVYETRENMKI
ARSCIKHGAVSLDGGIMRANGVLAVGQWEPEIQFPVVNKPTSKLHRSLHAMDNLKEVEEK
KLNLRQIFNEIEEETKAHEKTLQKFENIRDRYKEFLEEKGPLLLHLGVRI
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaggccgagcagtgaaggcaaatcattcggatggccttgcaagaggcttttc
acggactacgtggagaacggcgacgacgacgcccccggcgtggggaaggtgtataagttt
cgagttctgttgccgaacggcaccagcttggggcttacaatccgagaccccgaaatggac
ttggatttggaagagtttgtgcacttagtgaaggcagagtatttcaagactattagggaa
tccgggtctccgaagcccaagaggagagtcgactggaggagcagaaacttgtgttttgtg
gatgcttttgatgatgtgttgggaacaagaatcagttttcggaaatttcagcccaataag
taccacattctgaggcttcatgatgggtccggggaagccgaaacttacgagaacatgtgg
gatttgactccggatactgaaatgctgagggagctaccacacgaatactcctttgagacc
gctcttgcagatctcattgacaattcgttgcaagctgtatggtctaacagtgttgacgag
agaagattaattagtgttgatctcactgatgatagaattttaatttttgatactggccct
ggaatggatggtagcgaagagaactccatagcaaagtggggaaagattggcgcttctttg
cacaggtcatcaaggggccgtggtataggtgggaaaccaccatatttaatgccttttttt
gggatgtttgggtatggaggaccgattgcttccatgcatctgggaaggaatgctttggtg
tcttctaagactaaagaatcaaagaaggtctactctttgcgtctagagagagacacttta
ctaagcagttctaattcagaaaagagatggacgactgagggtggcattaggcaactgaca
gaagatgaaataacgagatcacctcaaggttcctttaccaaggttgagatttttgatcct
aaaagaaaaggcttggacatagctcaactccaatgcaaattgaaggacatctattttcca
tatatacagtgtgatgaaatatcgattacaggcagaacaaccatgccaattgaatttcag
gttaatggggttgatttagcagagatacagggcggtgaggttgctattacaaacatacat
tcctgcaatggtccagagtttgttctacaactccacattatccaaagtgtcatggcatcc
agtagtgcaagaacacgagtatctcaagaagcaaatgctcgtctgaagtttgtttatttt
ccaatagtggagggaaaggagaatattgatcgaattttggaaaagttggaaacggaagga
tgtggactttcagaaagatttgaaacctttagtcgtgtttctgttcgacggttgggtcgt
cttcttccagatgctcgctggaaattgcttccttttatggaacctaagctaaaagtggga
gacaaagcacgaattttgaaacaaagcttggcaagagtgaaatgctttatagaaactgat
gctgggtttaatccaacaccatcaaagactgatttagcacaacaccatccttatactact
gctctgaagaacttcggtggcatgcccttggagatagaacaagagataaatctcaaaatt
tataaggatgggaagcaacagacacttttgcaagtagagaagatgtatcaggaatggatt
tgtcagatgcatgatcgttatgatgaggaagttgaatgtggtgatgatgaacctgttctt
gtagtcaacccctcaaacaagaagagactcggcatttcttctaatattttgagggttcac
aaagtgattcgaagaaagggagcttcctgggtgtcggggcagaaactgaaaattctgaaa
ggagcatgtgctggatgccacaagaacaatgtgtatgcgaccttagagtacattctgatt
gaaggattccaaggcgatgcaggtggggaggctcgcctgatttgcaggccactagctgtc
ccaattgagaatggttgtgccctcacattgcatgatgaacataccagtattgatatccgt
gattccatctccttacccatttctgtgatagaatctgggaagtgtctgaccatggaagct
ggtgagtgggagcgtgtagttgagaagaatcggcagaaattgccatatacaattgaaata
ttgagcggaaagcattgtcaagagctgggtgttgctgaaggggcattacccaacaattct
acagtgtatgctggacatgttcctcccaaggaaattgttgcagttgttcattctgcctcc
tctagtcctgccagttcttctaagaatttaaaccagaagtgcattgtgaaagaaaactta
gagatggggatgcaaattaaattcagggatattttcaagagtgaccaagattttattgat
ctatattctgtatacgtatcaccttcatcccgtaaagggttatatggtttatatatattt
tctgtgggatgcaagtttgcacacatatttcagaaagctggtgtttatatattttcattt
tttcttagaggggtgaattctatgacttgcgaaagaagagtagacgttaaggcatcgtct
gaggttggcagatgggggcaaataaatgatggagagagtctaccctacattacatgggtt
ggtatgtcttccccaccaatttcaattgcatgctatgatatgtacaacaatcggatgccc
tttgcatgtgttccgaaagtagtaatcaagattatctcgggaaggatggttctttgtaaa
gtgcataatatgaaattggatctgtcacccgatcgattgacgttgacaatcaaggatgca
ttggtagtaagtacacagctggataagatacggccacattatgaagccactttggttatc
tctcaatcagatgagttattccccatgtccatcccatgtgaagttcttcctggatactta
caaagcgttacaatccaaccaaaagatttggataagcaactacttccaggacaagctatc
aaggagcttatatttgagatgtttgatccatatggtaaccatgttgaggagggcttgcaa
gttcagttcaatgtggatggactttgtttccgagatcatgctggttctacttctacccat
aaggtcgatgagtgtgggtgcattaacctgagtggcctcttggaagttacagagggctat
ggaaaaaaagtatctatctctgttttatttaatgagaaaataatcttcaagaaagagttc
caaacagagaagagagtgctgaaaactgcattcatggtacctaagtgttgcatagctgga
tctgttctggaaaacatagtctttgaaattgtaaactctgaagatgaagtggatgaaacc
atccatgatgaagagtcaagtggccaatctcatacacttataataaaatcggggtccttg
gatgccaatgattcagcaacatatagtttctgctatgggcgctgcctagttcgttctatt
tcccttccccaagaggaagggatggtcaatcttatagcttctcactcgcgttacccagag
ctccatgtgaccatcaaggttcatgtcgtcctggaagcttcacaagtggagcctgacaac
atccaatcactgaacttggacggaaggggccctccccttcacgacttatctgttcttaaa
gttccaaaacttgaacaagacggtgtacatcagcagtgttctgttggcaggctctctttt
ctctgtgactcatcaactgataaggatgtagaaaacttggtggtttcaatcttgaaagat
ctgaaggaacttgagatggatgttcataaatacggcctggaagttggatgtcacgaggag
gcattaaagatgctcaatgtcaaaaaagttgaagttgaggaagaagtttctaggttgcaa
ggcagcttgacgtggagagaatcaacaatggaactgattgaaagcaaggcagactctgcg
gctgctgttatctgcagattgtttagagaatttcatttgcagaatagacaacattccttc
ttaaagaatgtacttggtgttgtagcatttcttggaacagttaaaagcaatgagcttagc
agaatattggcagcttacttgggggaggatcagatgcttgcaattgtgtgcaattcctat
gcagctgcagattatctggagaaatatgaacaagatggaaatgtggatcccgcacatgat
ctttatgcaattgccacagcactgggcaggcctgtatgtggtcggtatcttgtaatctgc
cttgaagatacaagaccatatacaggagaagttggaacccaaggtttatcattgccatta
cctaccttaccaggtggaaatactcctccaggttttctaggatatgcagttaacatgata
aatcttgggttccatcatatgtacacaaggacagaagctggtcatggtcttcgggagact
ttattctactgtcttttcggtgagcttcaagtttatgaaactagggaaaacatgaaaatt
gctaggtcctgcataaaacatggtgcagtctccctggatggtgggatcatgagagcaaat
ggagttcttgctgttgggcagtgggaaccggagattcagtttccagttgttaataaacca
acaagcaaattgcatcgctctctgcatgccatggataatctgaaggaggttgaagaaaag
aagttgaatttaagacaaatatttaatgagatagaggaagagactaaagctcatgagaaa
accttgcaaaagtttgagaatataagagacagatataaggagttcttggaagagaaggga
cccttgctgctgcatcttggggtacgtatatag
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