Diospyros lotus (date-plum): 127802377
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Entry
127802377 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127802377
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127802377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127802377
03041 Spliceosome [BR:
dlt03041
]
127802377
03032 DNA replication proteins [BR:
dlt03032
]
127802377
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
127802377
Spliceosome [BR:
dlt03041
]
Complex A
U1 snRNP components
Sm proteins
127802377
U2 snRNP components
127802377
Complex B
U1 snRNP components
127802377
U4/U6.U5 tri-snRNP components
127802377
Complex C
U2 snRNP components
127802377
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
127802377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
127802377
NCBI-ProteinID:
XP_052194100
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All DBs
Position
5:499785..517987
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AA seq
283 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNE
EREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAAGAAALAGPGIGRAAGRGIPTAPL
VQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQVSAPPMTYPAASPPVIRPPGQMPGYPG
QPPQQMARGPPPPMPPQFAPRPGSAPPPQFQVPPPQFGQRPMGPPPQMMRGPPPPPRPGM
PAPPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQQQQQNQQQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtccaagagctcgaagatgcttcagttcatcaactataggatgcgtgtaacg
atccaggacggcaggcaactggtcggcaagttcatggccttcgataggcatatgaatctc
gtcctcggcgactgcgaggagttccgcaagttgcctcccgccaagggcaagaagaacgaa
gaacgcgaagagcgtagaactctgggattggttcttctaaggggcgaggaggttatatcg
atgacggtcgaggggcctcctcctcccgaggagtcccgagccaaggctgctggcgccgcc
gcattggctggtcccggaattggccgcgccgctggtcgtggaattcccactgcgccgctg
gtgcaggcgcagcccggcctagccggccccgttcgcggcgttggtggcccggcgccgggc
atgatgcagccccagatctcccggccccctgttccccaggtgtccgccccgccgatgact
tacccggccgcttctcctccagtgattcggccgccggggcagatgccgggttacccgggg
cagccgccgcagcagatggctcgcggtccgccgcccccaatgccaccgcagtttgctcca
aggccggggtcggctccgccccctcagttccaggttccgccgccgcagtttggacagaga
cccatgggtccgcctccgcagatgatgagaggacctccgcccccacctcggccaggaatg
ccagccccgccgcctcctcgacccgggatgccgcctccgcccggtggtgctgttccggtc
tatggcccgcctcgcccagggatgccgcctccgccaaaccctcaacaacagcagcagaat
cagcagcagtag
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