Diospyros lotus (date-plum): 127806352
Help
Entry
127806352 CDS
T10632
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127806352
Spliceosome [BR:
dlt03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
127806352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
INTS4_C
HEAT_2
Cnd1
HEAT_GCN1_C
HEAT_EZ
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
127806352
NCBI-ProteinID:
XP_052199540
LinkDB
All DBs
Position
7:2135065..2161026
Genome browser
AA seq
970 aa
AA seq
DB search
MEEEIHSECQCFLNEATMALDKPIPLQALAQARSLIVNPSTSEATISSLFQTLCHSLQTY
HHPLSLCHILSLLAAIVSHHPALSHSIFHAICSFSLHLHNTSARTVANALSVLASIAESD
QTLVSSLAELSEGTFLSLCFQTNVPVRHWLLLNATRLQVRPHLLLMLLLGFTKDPYPYVR
GVALDGLVALCKSSVVGDRALLESCYCCAVELLYDMEDSVRSAAVRAVSQWGQLLVASND
NNNRDWSDSLFVQICSMVIDMSMKVRIEAFNALGAFSMVSEAILVQTLSKKVLSTMKEKT
YPSLSSLKLVEMPASSVAGAFVHGLEDEFYEVRRSACYALQQLSILSADFAGEALNLVLN
VLNDDSMVVRIQALEAMCCMVLFDHLKVQETHMHMFLSTLIDTDASVRSAARKVLQVAKL
NDITTFKLAIDSLLENLETYPQDEAAIFSVLFSIGQCHGNFVVGIIERVSDEIERSSNGN
LGFDSGRVAALLVLAIAVPLSHEERTPSIPRTIFSYAVTLLGRISHALGNVVDQNTLLAY
LSHCSSSTVVSPAEFYFKKEMPSLVLMKCNLSRAMLVMSNNANEELPSPAEMQLQDLNVS
VSGIHFQRTSAPIKLPATLVDQQSEVQNDLIKLLELVLEKLKVMWQLIQLGCTGEVLKTL
RSWKEQLAKCTSGSSTGVLDFVSQCMRVVKLLAKIWPRINSPRKLSYARTGDLGLLLEKL
DRILKGLSYRFIGMSKQEELFVLELILVHYMLRLATVEACNDLTTFGKLFSTLPRVELIY
EEMAVEPSDFVSELKSLLHEIGSPTDGPFYSPSMFQKSVKIFSLKQFIFCGELKYIKAEL
DIPNNDIESPFHFVSGLPVGIQLEITLYNISRENRLWLRLVVDAVLTEFVFLDLGQYEGN
NEIRKFTFLSPFYRTPKANSFTVRVCLGMECLSEDSHLFGSSGGGPKKDLVYLCKEKEVC
FSQCVRKSEL
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagattcactcggagtgccaatgcttcctcaatgaagcaacaatggccctt
gacaagcccattcccctacaagccctagctcaagctcgatctctcatagtcaacccctcc
acctctgaagccaccatctcttcgctctttcaaaccctatgccattctctccagacatac
catcaccctctttccctctgtcacattctctctctcctcgctgccatcgtctcacaccac
cctgccctttctcactctatcttccatgccatctgctccttctccctccacctccataac
acctcggctcgcactgttgccaatgctctctctgtcctagcctcaattgctgaatctgac
cagacattggtatcctcacttgctgagcttagcgagggcacatttctctccctttgcttc
caaacgaatgtgcctgttcgacattggctgctgctgaatgcaacaaggctccaagttcga
ccgcatttgttgctgatgttattattagggttcaccaaggatccatatccatacgtgagg
ggggttgctttagatgggctggtggctttgtgcaagtctagtgttgttggggaccgtgct
ctcctcgagagttgctattgctgtgctgttgaacttctatatgacatggaggactctgta
aggtctgcagcagttcgagcggtttctcaatggggacaattgcttgtggcatcgaacgac
aataataatagggattggtcagactcattatttgtccaaatttgttctatggtgatagac
atgagtatgaaggttagaattgaagcttttaatgcccttggggcgtttagtatggtctct
gaggccattctggtacagaccttatccaagaaggtcctttccaccatgaaagagaagact
tatccttccctgagctctttgaaattggttgaaatgccagcatcaagtgtggctggagct
tttgtacatgggctggaggatgaattctatgaggtgcgaaggtcagcctgttatgcattg
cagcaactcagcattctctccgctgattttgctggtgaagcattaaacttagtgttgaat
gtattaaatgatgattcaatggtagttcgtattcaggctttggaagcaatgtgttgtatg
gtactatttgaccatctaaaggtgcaagaaacacatatgcatatgtttcttagcactcta
attgacactgatgcatctgtaagatctgctgcaaggaaagtacttcaagtagcaaagctg
aatgacattactacctttaaattggccattgatagtcttttggaaaatctggaaacgtat
ccacaggatgaagctgctatattttctgtcttattcagtattggtcaatgtcatgggaat
tttgtggttggcattattgaaagagtttctgacgagattgaacgttcttctaatggcaac
ttgggctttgatagtggaagagtagctgcactgctagtgctggccattgcagttccactc
tcacatgaagagcggacacccagtattccacgtacaatattttcttatgctgtaacactg
ctaggaaggatttctcatgccttgggtaatgttgtggaccagaataccctgttggcctat
ttgtctcattgcagcagttctacagtcgtttctcctgcagaattttacttcaaaaaggaa
atgccatccttggtcctgatgaaatgcaatttgagtagggccatgctagtcatgtcaaat
aatgccaatgaagagctacctagtcctgctgagatgcaattgcaggacttaaatgtttca
gtctcaggtattcattttcagagaacaagtgcaccaattaagctgccagccacactagtg
gatcagcagtcagaggttcagaatgatttaataaaacttctggagcttgtgcttgagaaa
ctcaaagttatgtggcagttgatacaacttggatgcactggtgaagtactaaagacattg
agaagttggaaggaacagttggcaaaatgtactagtggttcatcaactggtgttttagat
tttgtttcgcaatgcatgagggttgtgaaactgctggcgaagatatggcctcgtattaac
tctccaagaaaactctcttatgctagaacgggagatttgggtcttttattagaaaagcta
gatagaatcctcaaaggactgagctataggttcataggcatgagcaaacaagaggagttg
tttgtgttggagctgatacttgtgcattatatgctaaggttggccactgttgaagcctgc
aatgatttaactacttttgggaagctgttttctacgttgccccgggtagaattgatttac
gaggaaatggctgttgaaccttctgattttgtgagtgaactcaagagtttgctgcatgag
attggttcccctactgatgggcctttctacagtccatctatgtttcagaagtcagttaaa
attttctccttgaagcagtttatcttctgtggagaactcaagtacataaaagcagaactg
gatattcctaacaatgacattgaaagtcctttccactttgtttcagggcttcctgttggt
atacaattagaaatcactttatataatatctcaagggagaataggttgtggctgcggctg
gttgtggatgcagttttaactgaatttgttttcctggatttgggccaatatgaaggcaac
aatgagattagaaaattcacatttctttcgcccttctacagaactcccaaagcaaattct
ttcacagtgagggtgtgccttggtatggagtgcttgtctgaagatagccatttgtttgga
agttctggcggcggtccaaaaaaggatttagtttatctctgcaaggaaaaggaagtgtgc
ttctctcaatgtgtgcgaaagagtgagttgtga
DBGET
integrated database retrieval system
