Diospyros lotus (date-plum): 127806936
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Entry
127806936 CDS
T10632
Name
(RefSeq) RING-box protein 1a isoform X1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03420
Nucleotide excision repair
dlt04120
Ubiquitin mediated proteolysis
dlt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127806936
04120 Ubiquitin mediated proteolysis
127806936
09124 Replication and repair
03420 Nucleotide excision repair
127806936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127806936
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127806936
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
127806936
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127806936
Multi subunit type E3
SCF complex
Ring finger protein
127806936
Cul2 complex
127806936
Cul3 complex
127806936
Cul4 complex
127806936
Cul7 complex
127806936
Cul8 complex
127806936
Cul9 complex
127806936
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127806936
TCR (transcription coupled repair) factors
Cul4-CSA complex
127806936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
127806936
NCBI-ProteinID:
XP_052200516
LinkDB
All DBs
Position
7:complement(26994845..27011894)
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AA seq
141 aa
AA seq
DB search
MASPDTGVTMIPAGEGPSSSAATGSSKKLRRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWAGEVPTSTGANQVCTLQRVGATHWSSHFASVTRLIEMF
GSTCTFLANLIDEGSNNSVRG
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccggacacgggcgtgacgatgattccggccggcgaggggccgtcttcctcc
gctgctacggggtcgtccaagaagctgcggcgatttgaaatcaagaagtggaacgccgtc
tctctttgggcttgggatattgttgtggataactgtgcgatttgcaggaaccatatcatg
gatctctgcattgagtgccaggctaaccaagctagtgccacaagtgaggaatgtactgtt
gcttgggcaggagaagttccgactagtactggagctaatcaagtttgtactttgcaacga
gttggagctactcattggagttcacattttgcctctgttacaagattgattgagatgttt
ggttctacttgtacatttcttgcaaatcttattgatgaggggtcgaacaatagcgtacgt
gggtag
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