KEGG   Diospyros lotus (date-plum): 127812644
Entry
127812644         CDS       T10632                                 
Name
(RefSeq) GTP-binding nuclear protein Ran1B-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03008  Ribosome biogenesis in eukaryotes
dlt03013  Nucleocytoplasmic transport
dlt03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127812644
   03008 Ribosome biogenesis in eukaryotes
    127812644
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127812644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dlt03019]
    127812644
   03009 Ribosome biogenesis [BR:dlt03009]
    127812644
   03016 Transfer RNA biogenesis [BR:dlt03016]
    127812644
   03036 Chromosome and associated proteins [BR:dlt03036]
    127812644
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dlt04147]
    127812644
   04031 GTP-binding proteins [BR:dlt04031]
    127812644
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     127812644
Ribosome biogenesis [BR:dlt03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    127812644
  Pre-60S particles
    127812644
Transfer RNA biogenesis [BR:dlt03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    127812644
Chromosome and associated proteins [BR:dlt03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     127812644
   Spindle formation proteins
    127812644
Exosome [BR:dlt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127812644
GTP-binding proteins [BR:dlt04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    127812644
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid AAA_7 Septin AAA_22 AAA_16
Other DBs
NCBI-GeneID: 127812644
NCBI-ProteinID: XP_052209091
LinkDB
Position
11:30472595..30476301
AA seq 221 aa
MALPSQQTVDYPNFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDTFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttaccgagccagcaaactgtcgattatcccaacttcaagcttgtgattgttggc
gacggcgggacaggaaaaacaacatttgtgaaaagacatcttactggtgaatttgagaag
aaatatgagccaaccattggtgtggaagttcaccctctggatttcttcaccaactgtggg
aaaattcggttttattgctgggacactgctgggcaggagaaattcggtggccttagagat
ggatactatatccatgggcaatgtgccatcatcatgtttgacgtgactgcccgattaaca
tataagaatgttccaacatggcatcgggacctttgcagggtgtgcgagaacattcctatt
gtactttgtggaaacaaggttgatgtaaagaataggcaagtgaaggcaaagcaagttact
ttccatcgcaaaaagaatttgcaatactacgagatttcagcgaagagcaattacaacttt
gagaagccttttctttacctcgctagaaagcttgcaggggatccgaacttgcattttgtg
gagtctcctgcccttgcacctccggaagtgcacattgacttggctgcacaacaacagcac
gaggctgagcttgctgctgctgcaagtcaaccgcttccggatgacgatgatgacaccttt
gagtag

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