Dactylosporangium matsuzakiense: Dmats_38755
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Entry
Dmats_38755 CDS
T08700
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat00300
Lysine biosynthesis
dmat00550
Peptidoglycan biosynthesis
dmat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dmats_38755
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dmats_38755
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dmat01011
]
Dmats_38755
Enzymes [BR:
dmat01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Dmats_38755
Peptidoglycan biosynthesis and degradation proteins [BR:
dmat01011
]
Precursor biosynthesis
Amino acid ligase
Dmats_38755
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
nSTAND_NTPase5
Molybdopterin
Motif
Other DBs
NCBI-ProteinID:
UWZ43362
LinkDB
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Position
complement(8483349..8484848)
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AA seq
499 aa
AA seq
DB search
MSGYPRPRNVLPVLVGELIGELGGGTGNVAVTGVTHSSSAVQPGDLYVALPGARVHGAQF
IPEALQRGAVAVLTDPAGVRADAGVPFLVVDKPRDVLGEVASKVYGEPTRRLTTIGITGT
AGKTSTTYLIEAGLRAAGQVTGLIGTVETRLGDLTVKSIRTTPEATDLHALFAAALERGV
QSVAMEVSSHALEVGRVGGVRFAAAGYTNFGLDHLDFHPTVEAYFAAKARLFDGRAAVEI
LNADDVSVMRLRKPGSWTYSVRMDPVSDGESDFGVSGVTVDGYGQSFDVHWRGRTARSGV
QLPGRHNVANALLAIASLVAVGVDLDVAARAVAAAPGSPGRMERVDAPGDVVGVVDYAHK
PDAMVEVLKALRTLAASRGGRVICLVGAGGDRDRGKRPLMGRAAAEGADLVIVTDDNPRT
EDPAEIRAGVLTGTGGGPAEVVEIGGRREAIAFAVAQAKPGDVIALLGKGHETGQEVNGE
VLPFDDRVELAAALREASS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggctatccccgtccgcggaatgtcctccctgtgctggtcggtgagctcatcggc
gagctcggcggcggaaccggcaatgttgcggtcacgggggtgacgcacagtagctccgcc
gtacagccgggtgatctgtacgtggcgctgcccggcgcgcgtgtgcacggggcgcagttc
atcccggaggcgctgcagcggggcgcggtcgcggtgctcacggacccggccggggtgcgc
gctgacgccggagtgccgttcctcgtggtcgacaagccgcgggacgtcctgggcgaggtc
gcctcgaaggtgtacggcgagccgacccgccgcctgacgaccatcggcatcaccggcacc
gccggcaagacctccacgacctacctcatcgaggccgggctgcgggcggccggccaggtc
accggcctcatcggcaccgtcgagacgcggctgggcgacctcaccgtcaagagcatccgc
accacgcccgaggcgactgacctgcacgccctcttcgccgcggcgctcgagcgcggcgtg
cagtcggtggccatggaggtctccagccacgcgctggaggtcgggcgggtcggcggggtc
cgcttcgccgccgccggctacaccaacttcggcctcgaccatctggactttcaccccacg
gtggaggcgtacttcgcggccaaggcgcgcctgttcgacggccgcgccgccgtcgagatc
ctcaatgccgacgatgtgtcggtaatgcgactgcgcaagcccgggtcgtggacctattcc
gttcgcatggacccggtgtctgacggcgaatcggacttcggggtctcgggcgtgacggtc
gacggctacgggcagtcgttcgacgtgcactggcggggccgcaccgcgcggtccggagtg
cagctgccgggccgtcacaatgtggcgaacgcgctgctggcgatcgcgtccctggtggcc
gtcggggtcgacctggacgtcgccgcgcgggcggtggcggcggcgccgggctcgccgggc
cggatggagcgcgtcgacgcccccggtgacgtggtcggcgtcgtggactacgcgcacaag
cccgacgcgatggtcgaggtcctcaaggctctgcgcaccctcgcggcgtcgcgcggcggc
cgggtgatctgcctcgtcggagccggcggcgaccgcgaccgcggcaagcgcccgctcatg
ggccgggccgcagccgagggcgccgacctggtgatcgtcaccgacgacaacccgcgcacg
gaggacccggccgagatccgggccggggtgctcaccggcaccggcggcggaccggccgag
gtggtcgagatcggcggacgccgggaggccatcgccttcgcggtggcccaggccaaaccg
ggagacgtgatcgcactgctgggcaaggggcacgagacgggccaggaggtgaacggcgag
gtgctgccgttcgacgaccgggtggagctggccgcggccctgcgggaggcgagctcatga
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