Drosophila melanogaster (fruit fly): Dmel_CG10327
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Entry
Dmel_CG10327 CDS
T00030
Symbol
TBPH
Name
(RefSeq) TAR DNA-binding protein-43 homolog, isoform E
KO
K23600
TAR DNA-binding protein 43
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Dmel_CG10327 (TBPH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG10327 (TBPH)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
Dmel_CG10327 (TBPH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
37781
NCBI-ProteinID:
NP_001163280
FlyBase:
FBgn0025790
UniProt:
Q8SXP8
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All DBs
Position
2R
Genome browser
AA seq
531 aa
AA seq
DB search
MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGVRSNEGRL
FPPSVESGWGEYAYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTE
ESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKV
PNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDPDV
AQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFGMHSYHPQGNHMNPGR
NGHHRGNNQHNAHGGENAIVPNNHNIGTAGYGMGGNNYGGNSGGGYHNNGGNHSSGGNTN
RQDGGSQYNSRQSNFHGMNQPHNGNVGGSNGWMNRGHLDMPNLQALGINSQGSSSSNQGQ
NMSNQSMLNLNSLPINPALVAAALNQWSLVGNQLQNQNQDQQGGNFLSWMAQNGGHNNAN
NFGGRKGPNNPNNNPAANGIKTDNSEPQNGNTGWSNQSSGSQNAAEKSNFL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgttcaagtgtcggaggaggagggcgacgagcccatcgagctgccggctgag
gaggatggcactctgcttctgtccacactgcaagctcagttccctggatcctgcggtctg
aagtaccgcaacctggacacgaaggctgtgcgcggagttcgctccaacgagggcagactg
tttccgcccagcgtggagtccggctggggcgagtacgcttacttttgcgtctttcccaag
gagaacaagcgcaagagcgacgataacttggagaactcaactgccaagaccaaacgcatc
gagacccgtctgcgctgcactgatctcatcgtgctcggcttgccgtggaagaccacagag
gagagcttgcgtgagtacttcgagacctacggcgaggtgctgatggcccagatcaagaag
gacaccaagtcgggccagtccaagggcttcggtttcgtgcgcttcggctcttacgatgcc
cagatgcgcgtgctcaccaatcgccatctgatcgacggtcgctggtgcgaggttaaggtg
cccaactcgaagggcatgggccaccaggtgccttgcaaggtgttcgtgggccgctgcacc
gaggacattaactcggacgacttgcgcgagtatttctccaagtttggcgaagtcactgat
gtgttcattccccggcccttcagggcctttagctttgtaaccttccttgatcccgacgtg
gcacagtccctgtgcggagaggatcacattatcaagggcgtttcggtccatgtgtcgaat
gctgctccaaaggccgagcagaacagaaaccaacaggtccagagctacaactacaactct
gccaacagctttggcatgcactcataccacccacagggtaaccacatgaatccgggccgc
aacggacaccaccgaggtaataaccaacacaatgctcacggcggtgagaacgcaattgtg
cccaataatcacaacattggcaccgccggctacggcatgggtggcaacaattacggcggc
aactcgggcgggggctaccacaacaatggcggcaatcactccagtggcgggaacacgaac
cgccaggacggcggcagccagtacaacagtcgccagtcgaattttcacggaatgaaccag
ccgcataacggcaacgtgggcggcagcaacggctggatgaaccgtggccacctggacatg
cccaacctgcaggccctgggcatcaactcgcagggatcgagctcctccaaccagggccaa
aacatgagcaaccagtcaatgctcaatctcaactcattgcccatcaatcccgcactggtc
gctgccgccttgaaccagtggagcctggtcggcaaccagctgcagaaccaaaaccaggac
caacagggcggcaattttctatcttggatggctcagaacgggggccacaacaatgccaac
aactttggtggacggaaggggccgaataacccgaacaacaatccggccgccaacggaata
aagaccgacaactcggagccacagaatgggaacaccggttggtcgaaccagagcagcgga
tctcaaaacgccgcggagaagtcaaactttctttaa
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