KEGG   Drosophila melanogaster (fruit fly): Dmel_CG3949
Entry
Dmel_CG3949       CDS       T00030                                 
Symbol
hoip
Name
(RefSeq) hoi-polloi, isoform B
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03008  Ribosome biogenesis in eukaryotes
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG3949 (hoip)
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Dmel_CG3949 (hoip)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dme03041]
    Dmel_CG3949 (hoip)
   03009 Ribosome biogenesis [BR:dme03009]
    Dmel_CG3949 (hoip)
Spliceosome [BR:dme03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    Dmel_CG3949 (hoip)
Ribosome biogenesis [BR:dme03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    Dmel_CG3949 (hoip)
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1
Other DBs
NCBI-GeneID: 44173
NCBI-ProteinID: NP_001260293
FlyBase: FBgn0286786
UniProt: Q9U3Z7 D2NUK9
LinkDB
Position
2L
AA seq 127 aa
MTEEVNPKAFPLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAE
PIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQ
EIERLLV
NT seq 384 nt   +upstreamnt  +downstreamnt
atgactgaggaagttaatcccaaggcattcccgctggccgatgcccagcttaccgccaag
atcatgaacttgctgcagcaagcattgaactacaatcaactgcgcaagggagccaacgag
gccaccaagaccctcaatcgcggactggccgatattgtggtgctggccggtgatgcggag
cccatcgagattctgctccatttgccgctcctgtgcgaggacaagaacgtgccctacgtc
ttcgttcgttccaagcaggccttggggcgtgcgtgcggagtttcccggccaatagtcgcc
tgctctgtgaccaccaacgagggcagccagctcaagtcgcagatcacctccattcagcag
gagatcgagcgactgctagtctag

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