Dipodomys merriami (Merriam's kangaroo rat): 138807950
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Entry
138807950 CDS
T11079
Symbol
Sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04137
Mitophagy - animal
dmer04140
Autophagy - animal
dmer04217
Necroptosis
dmer04218
Cellular senescence
dmer04380
Osteoclast differentiation
dmer05014
Amyotrophic lateral sclerosis
dmer05022
Pathways of neurodegeneration - multiple diseases
dmer05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138807950 (Sqstm1)
04137 Mitophagy - animal
138807950 (Sqstm1)
09143 Cell growth and death
04217 Necroptosis
138807950 (Sqstm1)
04218 Cellular senescence
138807950 (Sqstm1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
138807950 (Sqstm1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138807950 (Sqstm1)
05022 Pathways of neurodegeneration - multiple diseases
138807950 (Sqstm1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
138807950 (Sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138807950 (Sqstm1)
03029 Mitochondrial biogenesis [BR:
dmer03029
]
138807950 (Sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmer04147
]
138807950 (Sqstm1)
Membrane trafficking [BR:
dmer04131
]
Autophagy
Mitophagy
Cargo receptors
138807950 (Sqstm1)
Pexophagy
138807950 (Sqstm1)
Aggrephagy
138807950 (Sqstm1)
Xenophagy
138807950 (Sqstm1)
ER-phagy
ER-phagy recepters
138807950 (Sqstm1)
Other autophagy associated proteins
Midbophagy
138807950 (Sqstm1)
Mitochondrial biogenesis [BR:
dmer03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
138807950 (Sqstm1)
Exosome [BR:
dmer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138807950 (Sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
138807950
NCBI-ProteinID:
XP_069849933
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MASVTVKAYLLGKEEATREIRRFHFNFGDSPEAEAEAEAAARPGPCERLLGRLAALFPAL
RAGGFQTHYRDEDGDLVAFSSDEELTMALSYVKDDIFRIYIKEKKECRRDHRPPCVQEAP
RSTVHPNVICDGCNGPVLGTRYKCTVCPDYDLCSVCEGKGLHREHSKLVFPSPLGHHSEG
FSHSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDARPNPTVESEASGPSEDPSVDFL
KNIGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEDKCSSQPSSCSSEVGKQA
GNGEGTAQSLTEQMKKIALESVGQPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQ
MPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLL
QTKNFDIGAALDTIQYSKHPPPL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtcaccgtgaaggcctaccttctgggcaaggaggaagcgacgcgggagata
cgccgcttccacttcaacttcggcgacagccccgaggccgaggccgaagcggaggctgcg
gcccgcccggggccctgcgagcggctgctgggtcggctggctgcgctgttccccgcgctg
cgggccggcggcttccagacgcactaccgcgatgaggacggggacttggttgccttttcc
agtgatgaggaactgacaatggccttgtcctatgtgaaggatgacatcttccgcatctac
attaaggagaaaaaggagtgccgacgggatcaccgccccccctgtgttcaggaggctccc
cgaagcacagtgcaccctaacgtgatctgtgatggttgcaatgggcctgtgttgggaact
cgctacaagtgtactgtatgcccagactatgacctgtgtagcgtctgtgaggggaagggc
ttgcacagggagcacagcaagctcgtgttccccagccccttagggcaccactctgaggga
ttctcccacagtcgctggctccggaagctgaagcatgggcattttgggtggccaggctgg
gagatgggcccaccagggaactggagcccacgtcctcctcgagctggagatgcccgcccc
aaccccacggtggaatcagaagcttctggtccatcagaggatcccagtgtggatttcctg
aagaacataggggagagtgtggcagctgccctcagccctctgggcatcgaagttgatatt
gatgtggagcatggtgggaagagaagccgcctgactcctgtctccccggaaagttccagc
acagaagacaaatgtagttctcagccaagcagctgctcttctgaagtgggaaaacaggct
ggaaatggtgaaggcactgcccagtctctgacagaacaaatgaaaaagattgccctggag
tctgtggggcagcccgaggaacagatggagtctgataactgctcaggaggagatgatgac
tggactcatttgtcttctaaagaagtggatccatctacaggagaactccagtctctacag
atgccagaatcagaagggcccagctctcttgatccttcccaggagggacctacaggactg
aaggaagccgctttatacccacaccttccaccagaggctgacccccggctgattgagtcg
ctctctcagatgctgtccatggggttctcagatgaaggtggctggcttaccaggcttcta
cagaccaagaattttgatattggagctgctctggacaccatccaatattcgaagcaccca
ccgccattgtga
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