KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138811754
Entry
138811754         CDS       T11079                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03250  Viral life cycle - HIV-1
dmer05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    138811754
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    138811754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmer03019]
    138811754
Messenger RNA biogenesis [BR:dmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     138811754
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC1 APOBEC4 dCMP_cyt_deam_1 Toxin-deaminase N_NLPC_P60 MafB19-deam
Other DBs
NCBI-GeneID: 138811754
NCBI-ProteinID: XP_069855657
LinkDB
Position
Unknown
AA seq 400 aa
MQLQRQRPRAGLGPSCLGCLYPSTQIRNPMFTLSQGSFYFHFQNLLYANDRHTTFLCCRV
EREQEGLIDTRVFKNQGIHAELCFIHWFHDEEFFPGEDYQLTWYMSWSPCPDCAEQVAQF
LAVHRNVSLTIFIARLYYHWLPQFQQGLRRLCQEGAQVEVMSYQEFEDCYEEFVKKSFRP
WKGLYTNYKKQEDKLRRILGSTVSLLKEETFLFQFNNRHRVPRHCGQHRPRRRTYLCYLL
ARPGDTTAPTKGCLQNKKGHHAEIRFIERIRSMGLDPSQDYQITCYLTWSPCLDCAFKLA
KLKKDFPRLTLRIFTSRLYFHWIRKFQKGLYELWLSGVLVAIMGLQEFTDCWNNFVNHQQ
RSFAPWEKLDAYSKNIRERLGRILRSWGCGPPPSSGGDSR
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgcagctgcagcgccagagaccaagagccgggctgggaccctcctgcctgggatgtcta
tatccgtctacacagataagaaaccccatgttcaccttaagtcaaggatcgttctacttc
catttccaaaaccttctttacgccaatgaccggcacacaaccttcctatgctgtcgagtg
gaaagagaacaggaaggcctgatagacacgagggtcttcaaaaaccagggcatccacgcg
gagctctgcttcatccattggttccatgacgaggagttcttccccggagaggactaccag
ctcacctggtacatgtcgtggagcccctgccccgactgtgcggagcaggtggcccagttc
ctggcggtacaccgcaacgtgagcctgaccatcttcatcgcccggctctactaccactgg
ctgccccagttccagcaggggctccgccggctgtgccaggagggggcccaggtggaggtc
atgtcctaccaagaatttgaagactgttatgaagagtttgtgaagaagtccttcaggccg
tggaaggggctgtacactaattataagaaacaggaagacaaactgaggagaattctcgga
agcacggtgagtctgttaaaagaagaaaccttcctcttccagttcaacaaccggcaccgg
gtgcccaggcactgcggccagcaccggccccgcaggaggacctacctgtgctacctgctg
gctcgccccggggacaccaccgcccccaccaaaggctgccttcaaaacaagaaaggtcac
cacgcagaaatccgcttcattgagagaattcggtccatgggcctggaccccagccaagac
taccagatcacctgttacctcacatggagcccctgcctggattgtgccttcaaactggct
aagctcaaaaaagacttcccgcgcctgactctgaggatcttcacctcccgcctgtacttc
cactggatccggaagtttcagaaggggctgtatgagctgtggctgtcaggggtgctggtg
gcgatcatgggcctccaagagtttactgactgctggaacaactttgtgaaccaccagcaa
agaagcttcgccccctgggagaaactggatgcgtacagcaagaacataagagagaggctg
ggccggatcctgaggtcttggggctgtggacctccaccatcctcaggaggggattcaagg
tga

DBGET integrated database retrieval system