Dipodomys merriami (Merriam's kangaroo rat): 138813138
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Entry
138813138 CDS
T11079
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138813138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138813138
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dmer04054
]
138813138
Membrane trafficking [BR:
dmer04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
138813138
Pattern recognition receptors [BR:
dmer04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138813138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
LRR_4
nSTAND3
AAA_14
AAA
Birna_VP5
AAA_24
RsgA_GTPase
AAA_22
ATPase_2
Motif
Other DBs
NCBI-GeneID:
138813138
NCBI-ProteinID:
XP_069857440
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MAGAEDTKISFPWKNEYFTQLLLLQKPYPKDQEPFFRKNWHQDEVERGHLIDIKDLFGPS
LDTQEQSPTVILYGSAGIGKSTLARQVRGAWEEDWLYRDRFQHIFFISCRELDQHGILSL
AELLEKDPAVPEVPIHQILSRPEQLLFILDGVDELQWTVERKIPYLDLHWSKRQPIYMLL
SKLLRRIMLPEASLLITARTTALSKLVPFLKQPCQVEVLGFSEFSRKEYFYKYFPDESQA
LRAFSLVESNPELLTLCLVPWVSWLVCTCLKQQMERWGDLILTSQTTTALCLRYLVQNLP
AQLLGTHLRGICSLAAEGIRWRKTVFTMDDLRKYGLRQDVISNFIGIGLLQDHQSMSYRF
THLCFQEFLAAVSFALEDEYPIFLIAEKDLQVEYRRHLLFEEPTIHFLFGLLSEQVTKEM
KCITHQLPQMRKRELLYWAQMKYRYQQPFSLEVLHCLYETQDEEFLTQVMQSFRRTRMCL
HTDMELLVAIFCIKFCSHVKRLQLIGPQRQVRRFPGVVLSMLTPLTDTSWKVLFSTLKVS
GSLKELDLSGNPLSCSAVQSLCENLRHPLCHLETLRLARCGLTSSCGQDLASLLSNSCTL
RELDLRQNDLGDLGVKLLCEGFKHPACQLTFLRLDQTSLSDTVKEELKALEEERLELLMS
TLWKTSELTPTERSDGGEIDNSPTSLKEPRLNSATEDVFFGPIGPVNTELIDSERHLCCV
HFPVAGFYHCGNTGLGFVVSRAVTITIEFCSWDTCLDKTWLQHTWMIAGPLFGIRAEQGT
VAAVHLPHFVDLQGEHVDISQFNVAHFKEEGMLLEKPARVEPQCAVLENPSFSPIGVLLR
MIPGFRHFIPIICTTLLYYYLNPDEVTLHLYLIPCDCSIQKAIDDEEEKFQFVRIHKPPP
LDALYLGSRYVVSGSEKMDIIPQELELCYRSPGVPQLFSEIFVSELDSAIRLKMKEKKNR
TLIWETLLKPGDFRSPATLVFPVLPAPKGGLASPHFVDRHRKQLVDRVTSVDSVLDLLHG
QILSEEQYEQVRAEATSPAQMRKLLSFSRAWGQNGRDQLYKALKKTHPHLIMELLEG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggctgaagacacaaaaataagcttcccttggaaaaatgagtatttcactcaa
ctgctacttctacaaaaaccttaccccaaagaccaggagcccttcttcaggaaaaactgg
catcaagatgaagtggagagaggacatttgattgacatcaaagatttatttggcccaagt
ctagacactcaggaacaatctccaacagtcatactgtatgggtctgccggaattgggaaa
tcgactctggccaggcaggtgagaggagcctgggaggaagattggctgtacagggaccga
ttccagcacatctttttcatcagttgcagggagctagaccagcatggcattttgagtctg
gctgagcttcttgaaaaggacccagctgtcccagaagttcccattcatcagatcctgtct
aggccagagcagctgctcttcatcttagatggtgtggatgagctacaatggactgtagag
aggaagattccttaccttgatctgcactggagcaagcgtcagccaatttacatgctactg
agcaaattgctgaggagaatcatgcttcctgaggcttccctgctcatcacagctcggacc
acagctctctctaagctggtccctttcttaaagcagccatgtcaggtggaagtcctgggc
ttctctgagttcagcaggaaggaatatttctacaaatatttcccagacgagagccaagca
ctcagagcctttagcttggttgaatcaaaccctgaactcttgactctgtgtctggtgccc
tgggtgtcgtggctggtctgcacatgcctcaagcaacagatggagcggtggggggatctt
atactcacctcccagaccaccacagccctctgtctgcgctaccttgtccagaatctccca
gctcagctcctggggacacatctcagggggatctgctctctggctgctgaaggcatccgt
tggagaaagactgtattcactatggatgacttgaggaagtatggtttaagacaggatgtc
atttccaatttcatagggattggtctccttcaagaccaccaatctatgagctaccgcttc
actcacctctgtttccaggagttcctcgcagcagtgtcttttgccttagaggatgaatat
cctatcttcctgatagcagagaaagacttgcaagtagagtatagaaggcatctcctgttt
gaagaaccaaccattcacttcctctttggtcttttaagtgaacaagtaacaaaagagatg
aaatgcattacccaccaactgcctcagatgaggaaacgggagctgctatattgggcacag
atgaaatacaggtaccagcagccattttcgctggaagtgcttcactgtctttatgagact
caggatgaagagtttctgacccaagttatgcaaagtttcaggagaaccagaatgtgcctc
catacagacatggagcttctggtggccattttctgtattaaattctgcagccatgtgaag
aggcttcagctgattggaccgcagagacaagtacggagattccctggagtagttctgtcc
atgctgaccccactcactgatacctcgtggaaggttctcttctccactctcaaggtcagt
ggaagcctgaaggaattggacttaagtggcaatccactgagttgttctgcagtgcagagt
ctgtgtgagaacctaagacaccccctgtgccatctggagaccttgaggctggccagatgt
ggcctcacctccagctgcggccaggatctggcctctttgcttagcaacagctgcacgctg
agggaactcgacctgcgtcagaatgacctgggtgaccttggtgtgaagctgctctgcgag
ggtttcaagcatcctgcctgccaactcacattcctacggctagaccagacctctctgagt
gacacagtgaaggaggaactgaaggctctagaggaagagagacttgagctgctcatgtca
acactgtggaagacaagtgagctgacccctactgagagatcagatggaggagagatagat
aacagccccacctcactcaaggagccgagactaaactcagcaacagaagatgtcttcttt
ggtcccatagggccagtgaatactgagctgattgacagcgaaaggcacctgtgctgtgtt
cacttccctgtggccggcttctaccactgtggcaacacgggtctgggctttgtggtgagc
agggcagtgaccatcaccattgaattctgttcctgggacacttgcctggacaagacctgg
ctgcagcacacctggatgatagcagggcctctgtttggcatcagggctgagcaaggaact
gtggctgctgtgcatctccctcactttgtggacctccaaggtgagcatgtggacatctct
cagttcaacgtggcccactttaaagaggaggggatgctgctggagaagccagccagggtg
gagccacaatgtgcagtcctagagaatcccagcttctcaccaataggagttctactgagg
atgattcctggcttccggcacttcatccccatcatctgcaccacattgctgtactactac
ctgaatcctgatgaagtcaccttgcacctctacctgatcccctgtgactgcagcattcag
aaggccatagatgatgaagaagaaaagtttcaatttgtaagaatacacaagccaccccca
ctggatgccctgtacctgggttctcgctatgttgtatctggatctgagaagatggatatc
atcccccaggaactggagctgtgctatcggagccctggagtaccccagctcttctctgag
atctttgttagtgagctggactcagcaatcaggctgaaaatgaaagagaagaaaaatagg
actctaatatgggagaccttgctgaaaccaggagatttcagatcaccagctactctagta
tttccagtacttccagcccccaaaggtggcctggcctccccacactttgtggacaggcat
cgaaagcagcttgtggaccgagtgacatccgtggactcagtcttggacctgctgcatgga
cagatactgagtgaggagcagtatgagcaggtacgggctgaggccaccagtccagcccaa
atgcggaagctgttgagcttcagccgggcctggggccagaacggcagagaccaactctac
aaagccctgaagaagacacatcctcacttgatcatggaactcttggaggggtga
DBGET
integrated database retrieval system
