Dipodomys merriami (Merriam's kangaroo rat): 138813312
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Entry
138813312 CDS
T11079
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138813312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138813312
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dmer04054
]
138813312
Membrane trafficking [BR:
dmer04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
138813312
Pattern recognition receptors [BR:
dmer04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138813312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
AAA_16
LRR_6
NPHP3_N
AAA_14
AAA_24
AAA
ATPase_2
NB-ARC
AAA_5
nSTAND3
AAA_22
nSTAND_NTPase4
RsgA_GTPase
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
138813312
NCBI-ProteinID:
XP_069857804
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MSAQQSTPEEHLQGKNGSVTESKWNEDDLRTDGLVRSQGSNPRKPLSQSHSGTPTTSITR
QGAQHSTSPDTRVIHSEKVYGCDTMSRNLTILEIQRPFAKAGENYHIEARKIRSKNQKTK
KSFPWKNEYFTQLLLLQKPYPKDQEPLFRKSWYQDEVEKRGHLIDIRDLFGPSLDTQGQS
PTVILYGPAGIGKSTLARQMRGAWEEGWLYRDRFQHIFFISCRELDQRGISSLAELLEKD
PAVPEIPIHQILSRPEQLLFILDGVDELHWTVERKISYLGLHWSKRQPTYILLSNLLSRI
MLPEASLLITARTTALSKLVPFLKQPCQVEVLGFAEFSRKEYFYKYFPDESQALRAFSLV
ESNSELLTLCLVPWVSWLVCTCLKQQMERGEELPLTPQTTTALCLHYLVQNLPAQLLRTH
LRGICSLAAEGIRFRKTIFTIDDLRIYDLGQDVISNFIGIGILQEHQSMSYSFTHLCFQE
FLATVFFALWDEYPIFQRAEKDLQVEYRRHSLFEEPTIHFLFGLLSEKVKKEIKSITHQL
PQMEKRELLYWAQMKSRYQQPFSLKVLHCFYETQDEEFLTQVMQSFRRARIYLRTDMELL
VAIFCIKFCSHVKRLQLIGPQRQVQRFPGVVLSMWAPLTDTSWKVLFSTLKVSGSLKELD
LSGNPLSCSAVQSLCETLRHPQCHLENLRLARCGLSSSCCQDLASVLSNSCRLRELDLRQ
NDLGDLGVKLLCQRFKHPACQLTFLRLDQTSLSDTVKEELKALEEERLELLMSTLWKTSE
LTLTERSDGGEIDNSLTSLKEQRLNSEKDAQLVSELVSYLTAASQTILTGDCLGTEDVFL
GPIGPVNTELIDSERHLCCVHFPVAGFYHCPNMGLSFMVSRAVTITIEFCSWDTCLDKTW
LQHTWMIAGPLFGIRAEQGTVAAVYLPHFVDLQGEHVDISQFNVAHFKEEGMLLEKPARV
EPHCAVLENPSFSPIGVLLRMIPGARHFIPIICTTLLYYYLSPDEVTLHLYLIPCDCSIQ
KAIDEEEEKFQFVRIHKPPPLDALYLGSRYVVSGSGKMDIIPQELELCYRSPGVSQLFSE
ISVSDLNKAIRLKMEEKKNRTLIWETLLKPGDLRSPTTLVPPAPKGSLALTHFVDRHRKQ
LVDRVTSVDSVLDLLHGQILSEEQYEQVRAEDTSPAQMRKLFSFSRSWNWTCKDQLYQAL
NETHPHLIRELLEKS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaacaaagcactcctgaagagcacctccaggggaaaaatggctcagtcaca
gaaagcaagtggaatgaagacgacctcagaactgatggcttagttcggagccaaggatct
aaccccagaaaacctctctctcaatcacactcaggaacgccaacaacatcaatcactaga
caaggagcccaacattcaacatccccagatacacgggtcatccattcagaaaaagtctat
ggatgtgacacaatgtcaagaaatctaacaatattagagatacaacggccttttgctaaa
gcaggtgaaaactaccacatagaagccagaaaaataagatccaagaaccagaagacaaag
aagtctttcccttggaaaaatgaatatttcactcaactgctacttctacaaaaaccttac
cccaaagaccaggagccccttttcaggaagagctggtatcaggatgaagtggagaagaga
ggacatttgattgacatcagagatttatttggcccaagtctagacactcagggacaatct
ccaacagtcatactatatgggcctgctggaattgggaaatcgactctggccaggcagatg
agaggagcctgggaagaagggtggctgtacagggaccgattccagcacatctttttcatc
agttgcagggagctagaccagcgtggcatttcaagtctggctgagcttcttgaaaaggac
ccagctgtcccagaaattcccattcatcagatcctgtctaggccagagcagctgctcttc
atcttagatggtgtggatgagctacattggactgtagagaggaagatatcttaccttggt
ctgcactggagcaagcgtcagccaacttacatactactgagcaatttgctgagtagaatc
atgcttcctgaggcttccctgctcatcacagcgcggaccacagctctctctaagcttgtc
cctttcttgaagcagccatgtcaggtggaagtcctgggatttgctgagttcagcaggaag
gaatatttctacaaatatttcccagatgagagccaagcactcagagcctttagcttggtt
gagtcaaactccgaactcttgactctgtgtctggttccctgggtgtcgtggctggtctgc
acatgcctcaagcaacagatggagcgcggggaggagcttccactcaccccccaaaccacc
acagccctctgtctgcactaccttgtccagaatctcccagcccagctcctgaggacacat
ctcagggggatctgctctctggctgctgaaggcatccgttttagaaagactatattcaca
atagatgacttgaggatttatgatttaggacaggatgtcatttccaatttcatagggatt
ggtatccttcaagaacaccaatctatgagctacagcttcactcacctatgtttccaggag
ttcctggcaacagtgttttttgccttatgggatgaatatcctatcttccagagagcagag
aaagacttgcaagtagagtatagaaggcatagcctgtttgaagaaccaaccattcacttc
ctctttggtcttttaagtgaaaaagtaaaaaaagagataaaatccattacccaccaactg
cctcagatggagaaacgggagctgctatattgggcacagatgaaatccaggtaccagcag
ccattttcgctgaaagtgcttcactgtttttatgagactcaggatgaagagtttctgacc
caagttatgcaaagcttcaggagagccagaatttacctccgtacagacatggagcttctg
gtggccattttctgtattaaattctgcagccatgtgaagaggcttcagctgattggacca
cagagacaagtacagagattccctggagtagttctgtccatgtgggccccactcactgat
acctcgtggaaggttctcttctccactctcaaggtcagtggaagcctgaaggaattggac
ttaagtggcaatccactgagttgttctgcagtacagagtctgtgtgagaccctaagacac
ccccagtgccacctggagaacttaaggctggcaagatgtggcctctcctccagctgctgc
caggacctggcctctgtgcttagcaacagctgcaggctgagggaactcgacctgcgtcag
aatgacctgggtgaccttggtgtgaagctgctctgccagcgtttcaagcatcctgcctgc
caactcacattcctacggctagaccagacctctctgagtgacacagtgaaggaggaactg
aaggctctagaggaagagagacttgagctgctcatgtcaacactgtggaagacgagtgag
ctgacccttactgagagatcagatggaggagagatagataacagcctcacctcactcaag
gagcagagactaaactcagagaaagatgcccaactagtatcagagctggtctcatatctt
actgccgcctcacaaaccatcctgaccggggattgtctaggaacagaagatgtcttcttg
ggtcccatagggcctgtgaatactgagctgattgacagcgaaaggcacctgtgctgtgtt
cacttccctgtggctggcttctaccactgtcccaacatgggtctgagctttatggtgagc
agggcagtgaccatcaccattgaattctgttcctgggacacttgcctggacaagacttgg
ctgcagcacacctggatgatagcagggcctctgtttggcatcagggctgagcaaggaact
gtggctgctgtgtaccttcctcactttgtggacctccaaggtgagcatgtggacatctct
cagttcaacgtggcccactttaaagaggaggggatgctgctggagaagccagccagggtg
gagccacattgtgcagtcctggagaatcccagcttctcaccaataggagttctactgagg
atgattcctggcgcccggcacttcatccccatcatctgcaccacattgctgtactactac
ctgagtcctgatgaagtcaccttgcacctctacctgatcccctgtgactgcagcattcag
aaggccatagatgaagaagaagaaaagtttcaatttgtaagaatacacaagccaccccca
ctggatgccctgtacctgggttctcgctatgttgtatctggatctgggaagatggatatc
atcccccaggaactagagctgtgctatcggagccctggagtatcccagctcttctctgag
atctctgttagtgatctgaacaaagcaatcaggctgaaaatggaagagaagaaaaatagg
actctaatatgggagaccttgctgaaaccaggagatctcagatcaccaactactctagta
cctccagcccccaaaggtagcctggccttgacacactttgtggacaggcatcggaagcag
cttgtggaccgagtgacatccgtggactcagtcttggacctgctgcatggacagatactg
agtgaggagcagtatgagcaggtacgggctgaggacaccagcccagcccagatgcggaag
ctgttcagcttcagccggtcctggaattggacctgcaaagaccaattgtaccaagccctg
aatgagacccatcctcacctgatcagggaactcttggagaagagttga
DBGET
integrated database retrieval system
