Dipodomys merriami (Merriam's kangaroo rat): 138813313
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Entry
138813313 CDS
T11079
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138813313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138813313
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dmer04054
]
138813313
Membrane trafficking [BR:
dmer04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
138813313
Pattern recognition receptors [BR:
dmer04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138813313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
AAA_16
AAA
NB-ARC
AAA_14
LRR_6
nSTAND3
AAA_24
ATPase_2
AAA_22
AAA_5
AAA_30
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
138813313
NCBI-ProteinID:
XP_069857806
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MAGRSYRSSVPLLDPSEDEEEIEEGENGTASVLAARASMGEESICPQLSSVREGADMAGR
MICITALSHDLTVKDKGGGENDTFSISAAQSSIPEDIAWFLPCSARKGAHMAFKAYHFST
ISPDITKEEENMGGVGGDERRGGGGGGVFVGAISSSAAQLSIPEENVGSLPGFMSGTKEK
FQNLKTEEPSPAYFWKNEDLQQKFTQLLLLEKTHLRGQELLPKENWHQNEMEEVGHLIDI
GDLFGPGPGTQEEPQTVILYGPAGIGKSTLARQVKVAWEAGQLYRDRFQHIFCISCKELD
QHKMLSLEEIIMKDSSVHLKEILTRPEQLLFIIDGVDELPLVAEGMESYLCLHGSQPQLV
HTLVCSLLRRIMLPEASLLITAQTTALQNLIPFLKQPRCVEVLGFSESSRKEYFYKYFSE
ESQALKAFSLVESNPALLTLCLVPWVSWLVCTCLKQQMERGEELPLTSQTTTALCLHYLV
QTLPAQLLGTQIRKICTLATMGIWQSKTLFSVDDLSKCGVDSTIIITFSEISVLQKHSQS
QFYSFRHSCFQAFFAAMSFILWDEEGGIDLPDFFTDIIRLTQGDRSYLLVAPTINFLFGL
LSEPVVDVLEKIFTCKFRRLRLLHMWDWIQVENALQQPYSVEMFHFLYESQNERILSSAL
RWVNETRMYIQTDVELLVVTFCLKLCRHVKRLQLSEGGWPGDAGRPSGVVLSTRVPLTDT
SWKVFFSTLKDSEGLMELDLSGNLLSYSAVQSLCDTLRHPHCHLQTLRLVHCGLTPTCCK
DLASVLSTSSSLKNLDLRQNNLGDHGVKLLYEGLRHPPCHLKFLCLDQDSLSELVKGELR
ALKQERPELIISSRWNPSVMSPTEGQDRGEMSKSISSLKWQRQSPDDLKMEHVGKKYDFW
GPMGPVAIQAVEKQKSLYRVHFPVAGFYHCPNMGLSFVVIREVTISIEFCSWDTFLDKTS
LQHTWMVAGPLFDITAEQGAVAAVHLPHFLALQDEHVDISWFHVAHFKEEGMLLEKPARV
ESHCAVLENPSFSPVGLLLRIIPKARRLIRITSTTLLYYRCQPEDLTFHLYLIPNDCTIQ
KAIDGKEEKFQFVHIHKPPPLDPLYLSSRYIVSGSESLEIIPQELKFCYRSPEESQLFSE
ISVAHLGPGIRLQISDKKDGAVLWEAKVKPGDIRGAANVVTPPPADLPSPRDALALPHFV
DRHREQLVARVTSVDPVLDLLHGHMLSEEQYEQVRAQATRPDQMRKLFSFSRSWDWICKD
QLYQALNETHPHLIRELLEKS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtagatcctatcgtagctctgttccattacttgatccgtcagaagatgaagaa
gaaatagaagaaggagaaaatggaacagcttcagttttagctgctcgagccagcatgggt
gaagagagcatctgcccccagctcagctcagtgagagaaggagcagacatggctggcaga
atgatctgtatcacggctctatcgcatgatcttacagtaaaagacaaaggaggaggagaa
aatgacacattttcaatttcagctgctcaatcaagcattcctgaagacattgcctggttt
ctgccctgttcagcaagaaaaggagcacacatggctttcaaagcctatcacttttctact
atatcccctgatattactaaagaagaagaaaacatgggaggagttggaggagatgaaaga
agaggaggaggaggaggaggagtttttgttggggctatttcatcttcagctgcccaactt
agcattcctgaagagaacgtgggatccctgcctggcttcatgagtggaaccaaagaaaag
ttccagaatctgaagacagaggagcccagcccagcatatttctggaaaaatgaggatttg
caacaaaagttcacccagctgttacttttagaaaaaactcatctcagaggccaggaactc
ctcccgaaggaaaactggcatcagaatgaaatggaggaagtaggacatttaattgacatt
ggagatttatttggcccaggaccaggtacccaggaagaacctcaaacagttatattgtat
ggacctgctggaattggaaagtcaactctggccaggcaggtgaaggtagcctgggaggca
gggcagctctacagggaccgcttccagcacatcttctgcatcagctgcaaggagctagac
caacacaagatgctgagtctggaagagatcatcatgaaagactcatctgtccacctcaag
gagattctcactaggccagagcagctgctcttcatcatcgatggtgtggatgaactacca
ttggttgcagaggggatggaatcatatctctgtctgcacgggagccagcctcagctggtt
cacacgctggtgtgcagtttgctgaggagaatcatgcttcctgaagcttccttgctcatc
acagctcagaccacagctctacagaaccttatccctttcttaaagcagccacgttgtgtg
gaagtcctgggcttctctgagtccagtaggaaggagtatttctacaagtatttctcagag
gagagccaagcactcaaagcctttagcttggttgaatcaaaccctgcactactgactctc
tgtctggtgccctgggtgtcgtggctggtctgcacatgcctcaagcagcagatggagcgg
ggggaggagcttccactcacctcccagaccaccacagccctctgtctgcactaccttgtc
cagactctcccagctcagctcctgggaacccagatcaggaagatctgcactctggctact
atgggcatctggcaaagcaagactttgtttagtgtagatgacctcagcaagtgtggagta
gatagcaccatcattatcactttctcagagatcagtgttcttcaaaaacacagccagtct
cagttctacagcttccgtcattcttgtttccaggcattctttgcagcaatgtctttcatc
ttgtgggatgaggaggggggcattgacttgcctgactttttcacagatataataagatta
acacaaggggacagaagttatctgttggtggcaccaaccataaacttcctatttggtctt
ttaagtgaaccagtggtagatgtgctggagaagatcttcacctgcaagtttcgtcgattg
aggttgttgcacatgtgggattggatccaagtggagaatgcactacagcagccatattct
gtggagatgtttcactttctatatgagtctcagaatgagcgaatcctatcatctgcacta
agatgggttaatgaaacaaggatgtatatccagacagatgtggagctcttggtggtcact
ttctgccttaagctctgcagacatgtgaagaggcttcagctgagtgaaggtggatggcca
ggagatgcagggaggccttctggggtagttctgtctacacgggtccccctcactgacaca
tcttggaaagtattcttctctactctcaaggacagcgaagggttgatggagctggaccta
agtggaaacctgttgagttactctgcagtgcagagtctttgtgacacactgagacaccca
cattgccacctacagactttgaggctggtccactgtggcctcacccccacttgctgcaag
gacctggcctctgtgctcagcaccagctccagcctgaagaatctcgacctgcgtcagaac
aacctgggtgaccacggtgtgaagctgctctatgaggggctcaggcatcctccctgtcac
ctcaagttcctgtgtctggaccaggactcgctgagtgaactggtgaagggggagctgagg
gccctgaagcaagaaagacctgaattaatcatctccagcagatggaatccaagtgtgatg
agccctactgaaggccaagacagaggagagatgagtaagagcatcagctcactcaagtgg
cagagacaatctccagatgacctgaaaatggagcatgtagggaagaaatatgacttctgg
ggccccatggggcctgtggccattcaagcagttgagaagcagaagagcctttacagggtt
cacttccctgtggccggcttctaccactgtcccaacatgggtctcagctttgtagtaatc
agggaagtgaccatcagtattgaattctgttcctgggacacgttcctagacaagacttcc
ctgcagcacacctggatggtggcagggcctctgtttgacatcacagctgagcagggagct
gtagctgctgtgcacctccctcattttttggccctccaagatgaacatgtggacatctcc
tggttccatgtggcccactttaaagaggaggggatgctgctggagaagccagccagggtg
gagtcgcattgtgcagtcctagagaaccccagcttctctccagtgggacttctgctaagg
attatccccaaggcccggcgcctcatccgcatcacctccacaaccttgctctattatcgt
tgccaacctgaggacctcaccttccacctctacctgatccccaatgactgcaccattcag
aaggccatagatggtaaagaagaaaagttccagtttgtgcacatacacaagcccccgcca
ctggatcccctttacctgagctctcgctatattgtgtctggttctgagtcgctggaaatc
atcccccaggaactgaaattctgctaccggagccctgaagaatctcaactcttctctgag
atctctgttgcccacttgggtcctgggatcaggctacaaataagtgacaagaaagatgga
gctgtcctatgggaggccaaggtgaagccaggagacatcagaggtgcagccaatgtggtc
acaccacctccagcagacttaccttcacctcgagatgctctggccttgccacattttgtg
gacaggcatcgggagcagctggtggcccgagtgacatctgtggatcctgtcttggacctg
ctgcatggacacatgctgagtgaggagcagtatgagcaggtgcgggctcaggccaccagg
ccagaccagatgcggaagctgttcagcttcagccggtcctgggactggatctgcaaagat
caactgtaccaagccctgaatgagacccatcctcacctgatcagggaactcttggagaag
agttga
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integrated database retrieval system
