KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138816188
Entry
138816188         CDS       T11079                                 
Symbol
Thbs1
Name
(RefSeq) thrombospondin-1
  KO
K16857  thrombospondin 1
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04015  Rap1 signaling pathway
dmer04115  p53 signaling pathway
dmer04145  Phagosome
dmer04148  Efferocytosis
dmer04151  PI3K-Akt signaling pathway
dmer04350  TGF-beta signaling pathway
dmer04510  Focal adhesion
dmer04512  ECM-receptor interaction
dmer04820  Cytoskeleton in muscle cells
dmer05144  Malaria
dmer05165  Human papillomavirus infection
dmer05205  Proteoglycans in cancer
dmer05206  MicroRNAs in cancer
dmer05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    138816188 (Thbs1)
   04350 TGF-beta signaling pathway
    138816188 (Thbs1)
   04151 PI3K-Akt signaling pathway
    138816188 (Thbs1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    138816188 (Thbs1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138816188 (Thbs1)
   04148 Efferocytosis
    138816188 (Thbs1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    138816188 (Thbs1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138816188 (Thbs1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    138816188 (Thbs1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    138816188 (Thbs1)
   05205 Proteoglycans in cancer
    138816188 (Thbs1)
  09162 Cancer: specific types
   05219 Bladder cancer
    138816188 (Thbs1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    138816188 (Thbs1)
  09174 Infectious disease: parasitic
   05144 Malaria
    138816188 (Thbs1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dmer04131]
    138816188 (Thbs1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:dmer00536]
    138816188 (Thbs1)
Membrane trafficking [BR:dmer04131]
 Endocytosis
  Phagocytosis
   Opsonins
    138816188 (Thbs1)
Glycosaminoglycan binding proteins [BR:dmer00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138816188 (Thbs1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1
Other DBs
NCBI-GeneID: 138816188
NCBI-ProteinID: XP_069861859
LinkDB
Position
Unknown
AA seq 1173 aa
MGPAWGLCLLLLCPVCVCAANRIPESGGDGSVFDVLELAGAARRGSGRRLVKGPDPSSPA
FRIENADLIPPMPDDKFQDLVDAVRAEKGFLLLASLRQMKRTRGALLAVERKDQSGPVFA
VVSNGKAGTLDLSLDAQGRQQVVSVEEAFLATGQWRSITLFVQEDRAQLYIDCEKMESVE
LDVPIQSIFTRDLASTARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDVLRNKGCSSSTAN
VLLTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRSLRTIVTTLQDS
IRKVTEENKELANELRRPHFCYHNGVQYRNNEEWTVDGCTECHCQNSVTICKKVSCPIMP
CSNATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGVQQRGRSCDSLNNRCEGSS
VQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGE
ARETTACRKAACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTE
SQVCNKQDCPIDGCLSNPCFAGAKCTSHPDGSWKCGACPAGYTGNGIQCSDVDECKEVPD
ACFNHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGIEHAMANKQVCSPRNPCKDGTHDC
NKNANCNYLGHYSDPMYRCECRPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDN
CPNLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNC
PYNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCP
LEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHD
DDNDGVPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDF
RRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTE
RDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLR
NALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGP
IYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgggcccggcctggggactgtgcctcctgctcctgtgccctgtgtgcgtgtgcgccgcc
aaccgcattccagagtctggcggagacggcagcgtgttcgacgtgctggagctggccggg
gccgcccgcaggggctccgggcggcggctggtgaagggtcccgacccgtccagcccggct
ttccgcatcgagaacgccgacctgatccccccgatgcccgatgacaaattccaagacctg
gtggacgccgtgcgcgccgagaagggcttcctcctgctggcctccctgcggcagatgaag
cggacccgcggcgcgctgctcgccgtggagcgcaaggaccagtcgggccccgtgttcgcc
gtggtgtccaacggcaaggcgggcacgctggacctgagcctcgacgcgcagggccggcag
caggtggtgtcggtggaggaggccttcctggccaccggccagtggaggagcatcaccctg
ttcgtgcaggaggacagagcccagctctacatcgactgcgagaagatggagagcgtcgag
ctggacgtccccatccagagcatcttcacccgggacctggctagcacagcccgcctccgc
gttgccaagggggacgtcaacgacaacttccagggggtgctgcagaatgtgaggtttgtc
tttggaaccaccccagaagatgtcctcaggaacaaaggctgctccagctccactgccaat
gtcctgctcaccctggacaacaatgtggtgaatgggtccagcccggccatccgcaccaac
tacattggccacaagaccaaggacctacaagccatctgcggcatctcgtgtgatgagctg
tccagcatggtcctggagctccggagcctgcgcaccattgtgaccactctgcaggacagc
atccgcaaagtgacggaagagaacaaggagctggccaatgagctgcggaggccccacttc
tgctaccacaatggggtccagtacaggaataatgaggagtggacggtggatggctgtacc
gagtgccactgccagaattcagtgactatctgcaagaaggtgtcctgccccataatgcct
tgctccaacgccacagttcctgatggagagtgctgcccacggtgttggcccagcgactcg
gcggacgacggctggtctccgtggtccgagtggacgtcctgctcggcgacgtgcggcaat
ggcgttcagcagcgtggccgctcctgcgacagtctcaacaaccgctgcgagggctcctcg
gtccagacgcggacctgccacattcaggagtgtgacaagcgattcaaacaggatggcggc
tggagccactggtccccctggtcgtcctgctccgtgacatgtggtgacggcgtcatcacg
aggatccgtctctgcaactcccccagcccgcagatgaacgggaagccatgcgagggcgag
gcgcgggagaccacagcgtgcaggaaagccgcctgtcccatcaatggaggctggggtccc
tggtcgccgtgggacatctgctccgtcacctgtgggggaggggtgcagaaacgcagccgc
ctctgcaacaaccccacgccccagttcggaggcaaagactgcattggtgatgtgacagaa
agccaggtctgcaacaagcaggactgtcccatagatggatgcctgtccaacccttgcttt
gccggtgccaaatgcaccagccatcccgacggcagctggaagtgtggcgcctgcccggcc
ggctacactgggaacggcatccagtgcagtgacgtggatgagtgcaaagaagtgcccgac
gcctgcttcaaccacaacggagagcacaggtgtaagaacacagaccccggctacaactgc
ctgccctgcccgccgcgcttcaccggctctcagcccttcggcaggggcatcgaacacgcc
atggccaacaaacaggtgtgcagtccccgcaacccctgcaaagacgggacacatgactgc
aacaagaacgccaactgcaactacctgggccactacagcgaccccatgtaccgctgcgag
tgccggcccggctacgccggcaatggcatcatctgcggagaggacaccgacctggacggc
tggcccaacgagaacctggtatgcgtggccaatgccacctaccactgcaaaaaggacaac
tgccccaaccttcccaactcggggcaggaggactatgacaaggatgggattggcgacgcc
tgtgacgacgatgacgacaacgataagatcccagacgacagggacaactgcccgttccat
tacaaccccgcccagtatgactacgacagagacgacgtgggagaccgctgcgacaactgc
ccctacaaccacaacccagaccaggcagacactgacaacaacggggagggggacgcctgt
gccgccgacatcgacggggacggcatcctcaacgagcgcgacaactgccagtacgtgtac
aacgtggaccagagggacactgacatggacggggtgggagatcagtgtgacaactgtccc
ctggagcacaacccagaccagctggactctgactcagaccgcattggggacacctgtgac
aacaatcaggacattgatgaagatggacaccagaacaatctggacaactgtccctatgtg
cccaacgccaaccaggctgaccatgacaaggatggcaagggggatgcctgtgaccacgat
gatgacaatgacggcgtccctgatgacagggacaactgtaggctggtgcccaatcctgac
cagaaggactctgatggtgacggtcgaggtgatgcgtgcaaagacgactttgatcatgac
aatgtgccagacatcgatgacatctgtcctgagaatgttgacatcagtgagactgacttc
cgccgattccagatgattcctcttgatcccaaagggacatcccaaaatgaccctaactgg
gtggtacgccaccagggcaaagagcttgtccagactgtcaactgtgatcctggccttgct
gtaggttacgatgagttcaatgcggtggacttcagtggcaccttcttcatcaacaccgag
agggacgatgactacgccggctttgtgtttggctaccagtccagcagccgcttctacgtg
gttatgtggaagcaagtcacccagtcctactgggataccaaccccaccagggctcaagga
tactccggcctgtccgtgaaagtcgtgaactccaccacaggccctggcgagcacctgcgg
aatgccctgtggcacacaggaaacacccccggccaggtgcgcaccctgtggcacgaccct
cgtcacattggctggaaagatttcaccgcctacagatggcgtctcagccaccggcccaag
acaggcttcataagagtggtcatgtacgaggggaagaagatcatggctgactccggcccc
atctacgacaaaacctacgccggcggcaggctaggactgtttgtcttctctcaagaaatg
gtgttcttctctgacctgaaatacgaatgtagagattcctaa

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