Dipodomys merriami (Merriam's kangaroo rat): 138817738
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Entry
138817738 CDS
T11079
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04140
Autophagy - animal
dmer05014
Amyotrophic lateral sclerosis
dmer05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138817738 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138817738 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
138817738 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138817738 (C9orf72)
Membrane trafficking [BR:
dmer04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
138817738 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
138817738
NCBI-ProteinID:
XP_069864468
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSIVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCETESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVRQMPPCHEHIFNQRRYMRSELTAFWRATSEEDVAQDTIIYTDDSF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHCFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgcccgcctccatctccagctgttgccaagacagagatcgctttaagt
ggtgaatcacctttattagcagccacctttgcttactgggacaatattcttggtcctaga
gtaaggcatatttgggctccaaagacagaacaagtacttctcagtgatggagaaataact
tttcttgccaaccacactctgaatggagaaattcttcgcaatgcagaaagtggggctata
gatgtaaagttttttgtcttgtctgaaaaaggagtaattattgtttcattaatctttgat
ggaaactggaatggagatcggagtacatatggactgtcgattatacttccacagacagaa
cttagtttctaccttccacttcacagagtgtgtgttgatagattaacacatattattcgg
aaaggaagaatatggatgcataaggaaaggcaagaaaatgtccagaagattgtcttagaa
ggcacagagagaatggaagatcagggtcagagtattattcccatgcttactggggaggtc
attcctgtaatggaactgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagtactcaatgatgacgatattggtgacagttgtcatgaaggctttctt
ctcaatgctatcagctcacacctgcagacctgtggctgctctattgtagtaggtagcagt
gcagagaaagtaaataagatagtgagaacattatgcctttttctgacaccagcagagagg
aaatgctccagattatgtgaaacagaatcatcatttaaatatgagtcagggctctttgta
caaggactgctaaaggattccactggcagctttgttctccccttcagacaagtcatgtat
gccccctatcccaccacacacatcgatgtggatgtcaataccgtcaggcagatgccaccc
tgtcacgaacatatttttaatcagcgtagatacatgagatcagagctgacagcattctgg
agagctacttcagaagaggacgtggctcaggataccatcatctacacagacgatagcttc
actcctgacttgaatattttccaagatgttctgcacagagacactttagtaaaagccttc
ttagatcaggtcttccatttgaagcctggtttatctctcaggagtactttccttgcacag
tttttgcttgtccttcacagaaaagccttgacactaataaaatatatagaagatgatacg
cagaaagggaaaaagccctttaaatctcttcgcaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggcactagctgagaaaattaaaccaggcctacac
tgttttatcttcggaagacctttctacaccagtgtacaagaacgggatgttctaatgact
ttttaa
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