Dipodomys merriami (Merriam's kangaroo rat): 138822736
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Entry
138822736 CDS
T11079
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03018
RNA degradation
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138822736
09123 Folding, sorting and degradation
03018 RNA degradation
138822736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138822736
03041 Spliceosome [BR:
dmer03041
]
138822736
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138822736
mRNA degradation factors
5'-3' decay
Lsm complex
138822736
Spliceosome [BR:
dmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138822736
Complex C
U2 snRNP components
138822736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
138822736
NCBI-ProteinID:
XP_069871754
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaataccgtagaggagcccctagatctc
atcaggctcagcctggatgagcgtatttatgtgaagatgagaaatgaccgagagcttcga
ggcagattacatgcttacgaccagcatttaaatatgattctgggagacgtggaagaaact
gtgaccaccatagaaattgatgaggagacatatgaagagatatacaaatcaacaaaacgg
aatattccaatgctcttcgtccggggagatggcgttgtgctggttgcccctcctctgaga
gttggctga
DBGET
integrated database retrieval system
