Dipodomys merriami (Merriam's kangaroo rat): 138824831
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Entry
138824831 CDS
T11079
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
138824831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
TIG_plexin
PSI_Plexin-B
Insulin_TMD
TMEM98_N
Motif
Other DBs
NCBI-GeneID:
138824831
NCBI-ProteinID:
XP_069875282
LinkDB
All DBs
Position
Unknown
AA seq
1939 aa
AA seq
DB search
MARRAAGGAALSARAAAPAPPPPSAGPRGAPPRPPLPLPLLLLLPPLLLPPGAARAGALE
IQRRFSSPTPTNNFVLDGAAGTVYLAAVNRLYQLSGANLSLEAEAAVGPVADNPLCHAPQ
LPQSSCGHPRRLTDNYNKILQLDAGQGLVVACGTIFQGFCQLRRRGNISALAVHFPPAAP
PAAPVSVFPSMLNVAANHPNASTVGLLLPPAAGAAGSRLLVGATFTGFGSAFFPRNHSLE
DHRFENTPEISIRSLDAAGDPAKLFTYDLNPSDDNIFKIKQGAKEQHKLGFVRAFLHPPA
AAPPYAYLALNSEARAGDKDGQARSLLARICLPRAADGDPEKLTESYVQLGLQCAGGAGR
TDLYSRLVSVFPERELLFAVFERSPGGPAPRAAAAAAAPAALCAFRFADVHAAIRAARTS
CFVAPAPDVVAVLDSVVQGSGPTCEPKPNIQLLSEQLDCGAAHLQHPLSILQPLKASPVF
RAPGLTAVAVASINNYTVVFLGTANGRLLKVNLNETMHVVSSRVLTVAYGEPVHHVMQFD
PTDPGYLYLMTSHQMARVKVAACEAHATCRDCVGAADAYCGWCALETRCTLQQDCANSSQ
PHFWTSASEGPGRCPSMTVLPAEINVRQEYPGMILQISGGLPSLSGMEMACDYGGDIRTV
ARVPGPAYDHQLAYCNLLPQAHFPPFPDAQDHVTVEMALRVNGRSIVTANFTIYDCSRIG
HVRPREACTSCLSAPWPCFWCAQQHTCVSNQSRCEASPNPMSPQDCPQILPRSLAPVPTG
GSRDILVPVTSAAAFHGTALECSFGLEESFEAVWVNESVVRCNQVVLHTTQKSQVFVLSL
QLKGRPAQFLDSPDPMTVEVYNCAVGSPDCSQCLGREDLGHLCVWSEGCRPRGPLQPPPG
TCPAPEIRLIEPLSGPLDGGTLLTIRGRNLGRRLSDVAHGVWIGSVACEPLADRYTVSEE
IVCRTGPALGAFSSVVSVNASKEGHSRQRFSYVLPTVHSVEPFMGPQAGGTRITIQGSHL
HVGSELQVLVNDTDPCVELVRTESSITCTVPGGAAPVPVPVCVRMERRGCLLGNLTFQYM
QNPVIISISPRRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTLCKVLNATVITCPS
PGALSNASAPVDFFINGQAYVDEAALAEELLDPARGRRGGHFRLDYLPNPQFSTAKRERW
IKHHPGEPLTLVIHKEQDSLGLESHEYLVKIGQAACDIQIVSDRVIHCSVNESLGAAEGQ
LPITIQVGNFNQTIATLQLGGSETAIIVSIVVCSILLLLSVVALFVFCTKSRRAERYWQK
TLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYRHFVTRTFFPKCSSL
YEERYVLPSQTPGSPGGSPTPETHPLLGEWKIPEDRRPSMEEGVSLFSSLISNKHFLIIF
VHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTGIMKELLVDLIDASASKNPKLMLRRT
ESVVEKMLTNWMSICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWL
LRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDV
DLEWFASSTQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDTTLGRVK
DLDTEKYFHLVLPTDELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAIL
SIREDKPPLAVKYFFDFLEEQAERRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIE
KTDHIDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIQDMT
PLSEQEMNAHLAEESRKYQNEFNTNVAVAEIYKYAKRYRPQIMAALEANPTARRTQLQHK
FEQVVALMENNIYECYSEA
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcgccgcgggcggcgcagcgcttagcgcccgggccgccgcgcccgcgccg
ccgccgccctccgcgggcccgaggggcgccccgccgcgcccgccgctgccgctgccgctg
ctgctgctgctgccgccgctgctgctgccgcccggcgcggcgcgggccggcgccctggag
atccagcgccgcttctcctcgcccacgcccaccaacaacttcgtcctggacggcgcggcc
ggcaccgtgtacctggcggccgtcaaccgcctgtaccagctgtcgggcgccaacctgagc
ctggaggccgaggcggccgtgggcccggtggccgacaacccgctgtgccacgccccgcag
ctcccgcagtcgtcgtgcgggcacccgcggcgcctgaccgacaactacaacaagatcctg
cagctggacgcggggcagggcctggtggtggcgtgcggcaccatcttccagggcttctgc
cagctgcggcgccggggcaacatctcggcgctggccgtgcacttcccgcccgccgcgccg
cccgccgcgcccgtcagcgtcttccccagcatgctcaacgtggccgccaaccaccccaac
gcgtccaccgtggggctgctgctgccgcccgccgccggcgccgcgggcagccgcctgctg
gtgggcgccacgttcacgggcttcggcagcgccttcttcccgcgcaaccacagcctggag
gaccaccgcttcgagaacacgcccgagatctccatccgctcgctggacgccgccggcgac
ccggccaagctcttcacctacgacctcaacccgtccgacgacaacatcttcaagatcaag
cagggcgccaaggagcagcacaagctgggcttcgtgcgcgccttcctgcacccgccggcc
gccgcgccgccctacgcctacctggcgctcaacagcgaggcgcgcgcgggcgacaaggac
ggccaggcccgcagcctgctggcccgcatctgcctgccccgcgccgccgacggcgacccc
gagaagctcaccgagtcctacgtgcagctgggcctgcagtgcgcgggcggcgcgggccgc
accgacctctacagccgcctggtctccgtcttccccgagcgcgagctgctcttcgccgtc
ttcgagcgcagcccgggcggccccgcgccccgcgccgccgccgccgccgccgccccggcc
gcgctctgcgccttccgcttcgccgacgtgcacgccgccatccgcgccgcgcgcacctcc
tgcttcgtggcgcccgcgcccgacgtggtggccgtgctggacagcgtggtgcagggcagc
ggcccgacctgcgagcccaagcccaacatccagttgctgtcggagcagctcgactgcggt
gccgcccacctgcagcacccgctgtccatcctgcagcccctgaaggcctcgcccgtgttc
cgggcgccggggctcacggccgtggccgtggccagcatcaacaactacacggtggtcttc
ctgggcactgccaacgggaggctcctcaaggtgaacctgaacgagaccatgcatgtggtg
agcagccgcgtgctgaccgtggcctacggggaacccgtgcatcacgtcatgcagtttgac
cccacagaccctggctacctttacctcatgacctcacaccagatggcccgggtgaaggtc
gcagcgtgcgaggcgcacgccacctgccgggactgcgtgggcgctgccgacgcctactgc
ggctggtgcgctctggagacgcggtgcaccctgcagcaggactgcgccaactccagccag
ccacatttctggaccagtgccagtgaaggccccggccgctgcccctccatgaccgtgctg
cccgcggagatcaacgtgcgtcaggagtacccgggcatgatcctgcagatctcgggcggc
ctgcccagcctcagcggcatggagatggcctgtgactatggaggggacatccgcacggtg
gcccgggttccgggccccgcctatgaccaccagctggcctactgcaacctgctgccgcag
gcccacttcccgcccttccctgacgcccaagatcacgtgactgtggagatggccttgagg
gtcaacgggcgcagcatcgtcacagccaacttcaccatctatgactgcagccgcattgga
catgtgcggccccgggaagcctgcaccagctgcctgtcggcaccatggccctgcttctgg
tgtgcacagcagcacacctgtgtctccaaccagtctcgatgcgaggcctcacccaacccc
atgagcccccaggactgcccccagatcctgcccaggtctctggcgccggtgcccaccggc
ggctcccgggacatcctggtacccgtgaccagtgctgccgccttccatggtaccgccctg
gagtgcagcttcgggctggaggagagcttcgaggccgtgtgggtgaacgagtcagttgtc
cgttgcaaccaagtcgtgctgcacacgacacagaagagccaggtgtttgtcctcagcctc
cagctgaagggccgacctgcccagtttctggacagccctgaccccatgacagttgaggtc
tacaactgtgcggtgggcagccccgactgttcccagtgcctgggccgcgaggacctgggc
cacctgtgtgtgtggagcgagggctgccgcccacgaggccccctgcagccgccccctggc
acctgcccggcccccgagatccgcctgattgagccactgagtggccccttggatggtggg
accctgctgaccatccgcggcaggaacttgggccggcgccttagcgacgtggctcacggc
gtgtggattggcagtgtggcatgtgagccgctggctgacagatacacggtgtcagaggag
atcgtgtgccgcacggggccggccctgggtgccttctcgtcggtggtgagcgtgaatgcc
tccaaggagggccactcgagacagcgcttctcctacgtgctgcccaccgtccactccgtg
gagcccttcatgggcccccaggctgggggcacgaggatcaccatccaagggagccatctg
cacgtgggctccgagctgcaggtcctggtgaacgacacggacccctgcgtggagctcgtg
cgcacagagagcagcatcacctgcacggtgcccggaggcgccgcgcctgtgcccgtgccc
gtgtgcgtgcgcatggagcgcaggggctgcctgctcggcaacctcaccttccagtacatg
cagaaccccgtgatcatctccatcagcccccgccgcagccccgtcagcggcggcaggacc
atcaccgtagccggcgagcgtttccacatggtacagaacgtgtccatggctgtccaccac
atcggccgcgagcccacgctgtgcaaggtgctcaacgccactgtgatcacctgcccatcg
ccgggggccctgagcaacgcctcggcgcccgtggacttcttcatcaacgggcaggcctac
gtggacgaggcggccctggcagaggagctgctggacccggcccgggggcggcggggcggc
cacttccggctggactacctccccaacccccagttctccaccgccaagcgggagcggtgg
atcaagcaccacccgggggagcctctcaccctcgtcatccacaaggagcaggacagtctg
gggctcgagagccacgagtacctggtcaagatcggccaggcggcctgcgacatccagatc
gtctcggacagggtgatccactgctccgtcaatgagtccctgggtgcggccgagggccag
ctgcccatcacgatccaggtgggaaacttcaaccagaccatcgccacgctgcagctggga
ggcagcgagacggccatcatcgtctccatcgtcgtctgcagcatcctgctgctgctctct
gtcgtggccctgtttgtcttttgcaccaagagccggcgcgctgagcgctactggcagaag
acgctgcttcagatggaggaaatggagtctcagatccgagaggaaatccgcaaaggcttt
gccgagctgcagacggacatgacggacctgaccaaggagctgaaccgcagccagggcatc
cccttcctggagtacaggcacttcgtgacccgcaccttcttccccaagtgctcctctctt
tacgaagagcgttacgtgctgccctcccagacccccggctccccaggcggctcccccacc
cccgagacccacccgctgctgggggagtggaagattcccgaggaccgccggcccagcatg
gaggagggcgtcagcctgttctcctcactcatcagcaacaagcacttcctcatcatcttc
gtccacgcgctggagcagcagaaggactttgcagtgcgagacaggtgcagcttggcctcg
ctgctgaccatcgcgctgcacggcaagctggagtactacacgggcatcatgaaggagctg
ctggtggatctcatcgacgcctcggcctccaagaaccccaagctcatgctgcggcgcacc
gagtcggtggtggagaagatgctcaccaactggatgtccatctgcatgtacagctgcctg
cgggagacggtgggagagcccttcttcctgctgctgtgcgccatcaagcagcagatcaac
aagggctccatcgacgccatcaccggcaaggcccgatatacgctcaacgaggagtggctg
ctgcgggagaacatagaggccaagccccggaacctgaacgtgtccttccagggctgtggc
atggactcgctgagcgtgcgggccatggacacggacacgctgacgcaggtgaaggagaag
atcctggaggccttctgcaagaacgtgccctactcccagtggccccgggcggaggacgtg
gacctcgagtggtttgcctccagcactcagagctacatcctgcgggacctggacgacaca
tctgttgtggaggatgggcgcaaaaagctgaacacgctggcccactacaagatcccggaa
ggagcctccctggccatgagcctcacggacaagaaggacaccaccctgggcagagtgaaa
gacttggacacggagaagtatttccatttggtgctgcccacggacgaactggcagagccc
aaaaagtcccaccgccagagccaccgcaagaaggtgctcccggagatctacctgacccgc
ctgctgtccaccaagggcacgctgcagaagtttctggatgacctgttcaaggccatcttg
agcatccgggaagacaagccccctctggctgtgaagtacttcttcgacttcctggaggag
caggcggagaggagggggatctcggacccagacacactgcacatctggaagaccaacagc
ctgcctctccgcttctgggtgaacatcctgaaaaacccccagttcgtcttcgacatcgag
aagacggaccacatagacgcctgcctgtcagtcattgcccaggccttcatcgacgcctgc
tccatctctgacctgcagctgggcaaggactcgcccaccaacaagctcctgtacgccaag
gagatccccgagtaccgcaagatcgtgcagcgctactacaagcagatccaggacatgacg
cccctcagcgagcaggagatgaacgcccacctggccgaggagtccaggaaataccagaac
gagttcaacaccaacgtggccgtggcagagatctacaaatatgccaagaggtatcgccct
cagatcatggccgccctggaggccaaccccacggcccgcaggacgcagctgcagcacaaa
tttgagcaggtggtggcgctgatggagaacaacatctacgaatgctacagcgaggcctga
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