KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138825683
Entry
138825683         CDS       T11079                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03420  Nucleotide excision repair
dmer04066  HIF-1 signaling pathway
dmer04110  Cell cycle
dmer04114  Oocyte meiosis
dmer04120  Ubiquitin mediated proteolysis
dmer04141  Protein processing in endoplasmic reticulum
dmer04310  Wnt signaling pathway
dmer04350  TGF-beta signaling pathway
dmer04710  Circadian rhythm
dmer05170  Human immunodeficiency virus 1 infection
dmer05200  Pathways in cancer
dmer05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    138825683
   04120 Ubiquitin mediated proteolysis
    138825683
  09124 Replication and repair
   03420 Nucleotide excision repair
    138825683
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    138825683
   04350 TGF-beta signaling pathway
    138825683
   04066 HIF-1 signaling pathway
    138825683
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    138825683
   04114 Oocyte meiosis
    138825683
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    138825683
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    138825683
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    138825683
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    138825683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dmer04121]
    138825683
   03400 DNA repair and recombination proteins [BR:dmer03400]
    138825683
Enzymes [BR:dmer01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     138825683
Ubiquitin system [BR:dmer04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   138825683
  Multi subunit type E3
   SCF complex
    Ring finger protein
     138825683
   Cul2 complex
     138825683
   Cul3 complex
     138825683
   Cul4 complex
     138825683
   Cul7 complex
     138825683
   Cul8 complex
     138825683
   Cul9 complex
     138825683
DNA repair and recombination proteins [BR:dmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      138825683
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      138825683
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 138825683
NCBI-ProteinID: XP_069876467
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggatgtggacaccccgagcggcacgaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctgtgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccatattatggatctttgcatagaatgtcaggctaaccag
gcatctgcgacttccgaagagtgtacggttgcgtggggagtctgtaatcatgcctttcac
ttccattgcatctctcgctggctcaaaacacggcaggtgtgccctttggacaacagagag
tgggaattccaaaagtatggccactag

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