Dipodomys merriami (Merriam's kangaroo rat): 138826176
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Entry
138826176 CDS
T11079
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
138826176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138826176
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Axon guidance molecules
138826176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRR_1
EGF_TEN
LRRCT
LRR_9
LRR_14
EGF_DL_JAG
EGF_Teneurin
EGF_3
EGF_4
LRR_EndoS
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
138826176
NCBI-ProteinID:
XP_069877426
LinkDB
All DBs
Position
Unknown
AA seq
1535 aa
AA seq
DB search
MALMPRWGTLAGLIRPELWLLLLWAVAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNI
PRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRN
QLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRA
LRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPSIGLF
TQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVATCTLSSGSCPAMCACSNGIVDCRGKG
LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFHGLRSL
NSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS
LAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQ
IKSKKFRCSAKEQYFIPGTEDYHLNSECSSDVTCPHKCRCEASVVECSSLKLSKIPERVP
QSTAELRLNNNDISILEATGMFKKLTHLKKINLSNNKVSEIEDGTFEGASSVSELHLTAN
QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLHNVRLLSLYDNHITTISPGAFDT
LQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC
EEGQEEGSCLPRPQCPQECACLDTVVRCSNKHLQALPRGIPKNVTELYLDGNQFTLVPGQ
LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL
HGNGISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDM
EGKLLLTTPAKKFECQGPPTLAVQAKCNPCLSSPCQNQGICHNDPLEVYRCTCPSGYKGR
DCEVFLDNCSNSPCGNGGTCHALEDEEAGFMCSCPTGFEGPTCGVNTDDCVEHACVNGGV
CVDGVGNYTCQCPLQYTGRTCEQLVDFCSRDLNPCQHGAQCVATPDGPRCECAPGYTGDN
CSENQDDCRDHRCQNGAQCVDEVNSYSCLCAEGYRGQLCEIPPHTPAPSSPCEGAECQNG
AHCVDQGNRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAED
NGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVN
LSIDGGRPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI
NNELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPADG
PCHGHKCVHGKCVPLDALSYSCQCQDGYSGALCNQAGAAAEPCGGLQCLHGHCQASATKG
AHCVCDPGFSGELCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGTCQGQGCCQ
GLRLKRRKLTFQCSDGTSFAEDVEKPTKCGCALCV
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgatgccccggtgggggaccttggcggggctgatccggccagagctctggctg
ctgctgctgtgggcagtcgcgtggcgcctgggtgccacggcgtgccccgccctctgcacc
tgcaccggcaccacggtggactgccacggcactgggctgcaggccatccccaagaacatc
ccacggaacaccgagcgcctggaactcaatggcaacaacatcactcggatccacaagaac
gactttgctgggctcaagcagcttcgggtgctgcagctgatggagaaccagattggagca
gtggagcggggagcgttcgatgacatgaaggaactggagcgactacgactgaaccggaac
cagcttcacatgttgccagaattgctgttccagaacaaccaggctctgtccagactggac
ctaagtgagaatgccatccaggccatccccaggaaggctttccggggagccactgacctc
aaaaatctacagctggacaagaaccagattagctgtatcgaggaaggggccttccgtgcc
ctgcgggggctggaggtgttgaccctgaacaacaacaacatcaccaccattcctgtgtcc
agcttcaaccacatgcccaagctccggaccttccgcctgcactccaatcacctgttctgc
gactgccacctggcctggctctcacagtggctaagacagaggccaagcattgggctcttc
acccagtgctcagggcccgccagcctgcggggcctcaatgtagctgaggtccagaagagt
gagttcagctgctcaggtcagggagaggcagggcgtgtggccacctgcaccctctcctcc
ggctcctgcccggccatgtgtgcctgtagcaatggcatcgtggattgccgtggtaaaggc
ctcactgccatccctgccaacctgcccgagaccatgacggagatccgtctggagctcaac
gggatcaagtccatcccccctggagccttctctccctacagaaagctgcgcaggatagac
ctgagcaacaaccagatagccgagattgcacctgatgccttccatggcctccgctccttg
aactcactggtcctctatgggaacaagatcacagacctgcctcgtggtgtgtttggaggc
ctgtacaccttacaactcctgctcctgaacgccaacaagatcaactgcatccgacccgat
gccttccaggacctgcaaaacctctcgctcctctccctgtatgacaacaagatccagagt
cttgccaagggcacgttcacctccctgcgggccatccagaccctgcatctggcccagaac
cctttcatctgtgactgcaacctcaagtggctggcggacttcctgcgcaccaaccccatc
gagaccagtggggctcgctgcgccagcccccggcgcctggccaacaagcgcatcgggcag
atcaagagcaagaagttccggtgctcagccaaagagcagtacttcatcccaggcaccgaa
gattatcacctgaacagcgagtgcagcagcgatgtcacctgtccccacaagtgccgctgt
gaggccagtgtggtggaatgctccagcctgaagctgtccaagatccccgagcgcgtgccc
cagtccacggccgagctgcggttgaacaacaatgacatctccatcctggaggccacaggg
atgtttaagaaacttacacacctgaagaaaataaacctgagcaacaacaaggtatcagaa
attgaagatgggacatttgagggcgcgtcctctgtcagtgaactgcatctgaccgccaac
caactagagtccatccggagtggcatgttccggggtctggatggcctgcgcaccctgatg
ctgaggaacaaccgcatcagctgtatccacaatgacagcttcacaggcctgcacaatgtc
cgcctcctctcactgtatgacaatcacataaccaccatctcccccggggccttcgacacc
ctccaggccctctccacgctaaacctcctggccaaccctttcaactgtaactgccagctg
gcctggctgggcgactggctgcggaggaggaagattgtgacagggaacccgcggtgccag
aacccagacttcctgcggcagattcccctgcaggatgtggcgttccctgacttcaggtgt
gaggaaggtcaggaggagggaagctgcttgccccgcccccagtgtccccaggagtgtgcc
tgtctggacactgtggtcagatgcagcaataagcacctccaggctctgcccaggggcatc
cccaagaatgtcacagaactctatttggatgggaaccagttcacgctggttccgggacag
ctgtccaccttcaagtacctgcagcttgtggacctgagcaacaacaagatcagttcttta
agcaattcttccttcaccaatatgagccagctgaccactctgatcctcagctacaacgcc
ctccagtgcatcccacctctggccttccagggtctccgctctctgcgcctgctatccctc
catggcaatggcatctccaccctccaagagggcatcttcgcagatgtgacatccttgtct
cacctggccatcggtgccaaccccctgtactgtgactgccacctccgctggctgtccagc
tgggtaaagactggctataaggagccaggcattgcccggtgtgcagggcctcaggacatg
gagggtaaactgctgctcacgacacctgccaagaagtttgaatgccaaggtcccccaact
ctggctgttcaggccaagtgtaatccctgcttgtccagcccatgccagaaccagggcatc
tgccacaacgacccccttgaggtgtacaggtgtacttgtcccagtggttacaagggccga
gactgtgaggtattcctggacaactgttccaacagcccttgtggaaatggggggacctgc
catgccctagaggacgaggaagctggcttcatgtgctcttgtcctactggcttcgaagga
ccgacctgtggggtgaacacagatgactgtgtggagcatgcctgtgtcaatgggggtgtc
tgtgtggatggtgtaggcaactacacctgccagtgtcccctgcagtacactggaaggacc
tgtgaacagctggtggacttctgctcccgagatctgaacccatgtcagcatggggcccag
tgtgtggctactccagatgggcccaggtgtgagtgtgcacccggctacacgggtgacaac
tgcagtgagaatcaggatgactgcagggaccaccgctgccagaatggggcccagtgcgtg
gacgaagtcaacagttactcctgcctctgtgctgagggctacaggggacagctctgtgag
atccctccccacacaccagcccccagcagtccctgtgagggggctgagtgccagaatggg
gcccactgtgtggaccagggcaaccggcctgtgtgccagtgcctcccaggctttggtggt
cctgagtgtgagaagttgctcagtgttaactttgtggatcgagacacttacctgcagttc
actgacctgcagaactggccacgggccaacatcaccctgcaggtctccacggcagaggac
aatgggattctgctgtacaatggggacaatgaccacattgccgttgagctgtaccagggc
catgtgcgagtcagctatgacccaggcagctatcccagttctgccatctacagtgctgag
acgatcaatgatgggcagttccacactgtcgagctggtcacctttgaccagatggtgaat
ctctccatcgatggcggcaggcccatgaccatggacaactttggcaaacactacacgctc
aacagtgaagctcccctctatgtgggaggaatgcccgtggatgtgaactctgctgccttc
cgcctgtggcagatcctcaatggcaccagcttccatggatgcatcagaaacttgtacatc
aacaacgagctgcaggacttcactaagacacagatgaaaccgggtgtggtgccaggctgt
gagccgtgccgcaagctctactgcctgcatggcatctgccagcccaatgccaccccaggc
cccgtgtgccactgtgaggctggatgggggggcctgcactgtgaccagccagctgatggc
ccctgccatggccacaagtgtgtccatgggaagtgcgtgcctctcgatgctctttcctac
agctgccagtgccaggacgggtactcgggggccctgtgcaaccaggctggggctgcggca
gagccctgtgggggcctgcagtgcctacacggccactgccaggcctcagccaccaaggga
gcacactgtgtgtgtgaccctggcttttctggcgagctgtgtgagcaagaatccgagtgc
cggggggaccctgttcgggactttcaccgggtccagaggggctatgccatctgccagacc
acgcgcccactgtcgtgggtggagtgccggggcacatgccagggccagggctgctgccaa
ggcctgcggctgaagcggaggaaactcaccttccagtgcagcgatgggacgtcgtttgcc
gaggacgtggagaaacccaccaagtgcggctgtgcgctctgcgtgtag
DBGET
integrated database retrieval system
