Dipodomys merriami (Merriam's kangaroo rat): 138827198
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Entry
138827198 CDS
T11079
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04015
Rap1 signaling pathway
dmer04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
138827198
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138827198
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Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
138827198
NCBI-ProteinID:
XP_069878796
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MNSPVDPGARQALRKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSERARYERYSG
NQILFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEEEEI
DQTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAVILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLKSPLDVGVKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKHLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGVFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGIPHIPKIAEKKSNRHSIQDVPGDIEQPSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHA
VHEFGLTGATDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKRGNAHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
PVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGTHKKRARRSSLLNAKKLYEEAQMARKVKQYLSGLDVETDEEKFQVMSL
QWEPAYGTLTKNLSEKRSAKSSEMSPVPLRSASQTAKAHLHQPHRGSQMLPVPAVNLHPV
RKKVQARDTALILGTNLPQKVLGAEEVSGKRHAEDTVSVASSLHSSPPASPQGSLRKGYT
LLPSAKSDNLSESSHSEISSRSSIVSNCSVDSMSAALPDERGSSQPLTGPEFSAPSEKSD
HPLGIGEHSQLGSGWALSKSSLIKGLAVSSSTSSEEISHEHVIIEAADSGRGSWTSCSSS
SHDNFQNLPNPKSWDFLNSYRHTHLDDPIAEVEPTDCEPHSCPKSCSRTCGQCKGSLETD
ELRQSWASSSSLSDASEPNYGTVRRRVTDRTPAHTADSSDPKDATDPLYKTVTSSTEKGL
IVYCVTSPRKDGRFREPPPTPPGYLGISLADLQEGPHPHLKPPEYSVAVQRSKMMQNSLC
RPPPASLSSSPVACGPSKTVSQPHRHSLQPSRPRLTEVTDADSGADENEQVSAV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccctggcgctcggcaggcgctgaggaagaagccgccggagcgg
acgcctgaggacttaaatactatttattcttaccttcatggaatggaaatactatcaaat
ctcagggaacatcaactgaggttaatgtctgaaagagcacgctatgagagatacagtggc
aatcagatacttttttgttcagaaactattgccagatgttggtatatactgctttctgga
tctgtgcttgtgaaagactccatggtcttacctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgacga
aggtttcggaaaattaactataaaggagagcgtcaaaccataactgatgatgtggacatt
aatagctacctttctcttccggctgaccttaccaagatgcaccttacagacaaccctcac
ccacaagtgactcacgtgtcctctagtcagtctggttgtagcattgccagtgactctggg
agcagcagtttgtctgatatctatcaggctacagagagtgaggtaggagacgtagattta
acacgtcttccagagggacctgttgattctgaggatgaagaagaggaggaggaagagatt
gaccagacagatccattgcaggggcgagatcttgttcgagaatgtcttgagaaggaacct
gcagataaaactgatgatgacattgagcaattgcttgagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtgaggagagagctatgctcagtgatgatcttcgaagtg
gtggagcaggctggagctgttattcttgaagatgggcaagagctggattcatggtatgtt
attttaaacggcactgtagaaatcagtcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactcccactctggataagcagtacatgcatggaattgtcagg
actaaagtagatgactgtcagtttgtctgcatagctcagcaggattattggagaatttta
aatcatgtggagaaaaacacccataaagttgaagaagagggagaaattgttatggtgcat
gaacaccgtgagctagacagaagtgggaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttgatagaagaacattccattgtggacccaacctatata
gaagattttctgttaacttatagaacatttcttaaaagtcctttggatgttggagtcaaa
ctattggaatggtttaagattgacagcttaagggacaaggtgacacgaattgtattatta
tgggtaaataatcatttcaatgactttgaaggtgatcctgctatgactcgatttctagag
gaatttgaaaaacatctggaagatacaaagatgaacggtcacctccggttattgaatatt
gcctgtgctgcaaaggccaagtggagacaggttgtactgcaaaaggcttcccgagagtcc
cccctgcatttcagcctcaatggaggaagtgaaaagggatttggtgtctttgttgaagga
gtagaacctggtagtaaagctgcagatgcagggctgaaacggggcgatcagataatggaa
gtaaatggacaaaattttgagaatattacatttgtgaaagccctggaaattttaaggaat
aacactcatcttgcacttacagtgaagactaacatttttgtgttcaaagagttacttagt
cggactgaacaagagaagtctggtattcctcatattcccaaaattgctgaaaagaaaagt
aatcgccattcaatccaagatgtaccaggagatatcgaacagccatcacaagagaaagga
aataagaaaataaaagcaaatactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagcatcctgcctccaaaactgtttagtgatggaggcctgagccag
tcacaagatgacagcattgtgggaaccagacattgtagacacagcctggctataatgcct
attcctggaacactctcatccagcagccctgatctcctgcagcctactactagcatgttg
gatttttctaatccttcagatattcctgatcaagtcataagagttttcaaagcagatcaa
cagagctgctacattatcatcagtaaagacactacagctaaagaagtggtttgtcacgct
gttcatgaatttggtttgactggggcaaccgatacatattctctctgtgaagtttctgtt
actcctgagggtgtcataaagcagagaagacttccagaccagttctccaaactagctgat
agaattcaactcaatggaaggtattacttaaaaaataacatggaaacagagacattatgt
tcagatgaagatgcacaagagcttgtaaaggaaagccagctgtccatgctgcagcttagt
accattgaagtggccacccagctgtccatgagggactttgacttatttcgtaatattgag
cctactgaatacattgatgatcttttcaagttagattccaagaggggaaatgctcacttg
aaagagtttgaggacattgtgaaccaagagacattctgggttgcctcagagattttaact
gaatcaaatcagctcaaacgaatgaaaatcattaaacattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgctataataagtggcttaaatctggca
cctgtagcacgacttagaggtacttgggaaaagttaccaagcaaatatgagaaacatctc
caggatctacaagacctttttgatccatcaagaaacatggcaaaatacagaaatattctc
agtagtcaaagcatgcagcctccaatcatcccactcttccctgttgtcaagaaagacatg
acatttctacatgaaggaaacgactccaaagtagatggcttagtaaactttgagaagcta
agaatgattgccaaggaaattcgtcaagttgttcgaatgacttctgcaaatatggacccc
gctatgatgttccgacagaggaagaagaggtggcggagtctggggtcattgagtcaaggc
agcacaaattcaaacatgctggatgtgcaaggaggtactcacaaaaaacgggcacgccgc
agctctctgctgaacgccaagaagctgtatgaggaggcccaaatggcacgcaaagtgaag
cagtatctctcaggtctggatgtggagacagacgaggagaagttccaggtgatgtcactg
cagtgggagcctgcatatggtaccttgaccaagaatttaagtgagaaaagatcagccaaa
tcatctgaaatgtctcctgtgcctttgaggtcagctagccaaacagctaaagcccacctg
catcagccccacagggggagccagatgcttccggtgcccgccgttaacctgcatcccgtc
aggaagaaggtgcaagctagagacactgcactgattttaggtacaaatttacctcagaaa
gttttaggcgctgaagaagtcagtggtaagagacatgcagaagacactgtctccgtggcg
tcctctctgcattccagtccccccgcgtctcctcagggctccctgcgcaaaggttacaca
cttttaccatcagctaaatctgacaacttgtctgaatccagccacagcgagatttcctcc
cggtccagcatcgtgagcaactgctctgtggactccatgtcagctgcgcttccagatgag
cggggttcgtcccagcccctgactggccccgagttcagtgccccctcggaaaagtccgat
caccctctgggaataggagagcacagtcagcttggttctgggtgggcactttcgaagtca
tctttaatcaagggcttagccgtctcatcttccacgagcagtgaggaaatttctcatgag
cacgtcatcatagaagcggctgacagcggtcgaggaagttggacttcctgttcaagcagt
tcccatgacaacttccaaaaccttccaaacccaaaaagctgggactttttgaattcctac
agacatactcatttggacgatcccattgctgaagttgaacccacagactgtgagccccat
tcctgtcctaaaagctgctctcgaacttgtggccagtgtaaaggaagcctggagactgat
gagctgcgacagagttgggcttcgtccagctcgctgtcagacgcaagtgagcccaactac
gggacagtcagacgcagagtgacggacaggacccctgcccacacagccgacagctcggac
cccaaggacgccactgacccactttacaaaaccgtcacttcaagtacggagaagggcttg
attgtatactgtgtcacatcacccaggaaggacggtaggtttagggagccgcctcccact
cctccaggatacctggggatctctctagccgacctccaggaaggaccccacccgcaccta
aaacctccagagtatagtgtggcagtgcaaaggtcaaagatgatgcagaacagcctctgt
aggccaccaccagcttctctcagtagcagtcctgtggcctgcggcccctcgaagactgta
tctcagcctcacaggcatagtttgcagccatcccgtcctagactaacagaggtgactgat
gcagatagcggagcagatgaaaatgaacaggtctcagcagtctag
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integrated database retrieval system
