Dipodomys merriami (Merriam's kangaroo rat): 138827487
Help
Entry
138827487 CDS
T11079
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer00310
Lysine degradation
dmer01100
Metabolic pathways
dmer04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138827487
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
138827487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138827487
Enzymes [BR:
dmer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
138827487
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
138827487
Heterochromatin formation proteins
Other heterochromatin formation proteins
138827487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
138827487
NCBI-ProteinID:
XP_069879139
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MSSLPGCIGLGAARAAMESEEIAELQQTVVQELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKETEVAHVDQLFDDASRAVTNCESLVKDFYSNLGLEYHDSSSEDESSQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQGL
HKGTLSPMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPIAPPVPPAPSALPAPPLSPQAGDNES
LESQLAQSRKQVAKKSTSCRPGSVGSGHSSPTSPPLNENASGGKSGINQTYRSPLGSTTS
APALSAPQLPPVSDELPIVSTTSAPAPPAPSGPPAPPAFHGMLERAPAEPSYRAPMEKLF
YLPHVCSYTCLSRIRPMRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCG
LCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLS
CVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATA
CTPGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQN
KGWGIRCLDDIARGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYES
DIPCSSDSSGVDMKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTR
GQKENGPTETASKDSRPPDLGPPHIPIPPSISVGGCNPPSSEETPKNKVASWLSCNSVSE
GGFADSDSRSSFKTNEVGEGRSGGGRGEAEKISTSVLGMKDEGDIKQAKKEDPDDRNKVS
VVTESSRNYGYNPHVKPEGLRRPSSKTNMHQSRRLMASAHANPDDVLTLSSSTESEGESG
TSRKPTAGQTSNAAVDSDDIQTISSGSEGEDFEDKKNMSGPTKRQVAVKSTRGFALKSTH
GIAIKSTNMASVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQ
NVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttgggtgcagcaagagctgcaatggagtctgaa
gagattgcagagctgcagcagacagtggtgcaggagctgggtatctctatggaggaactt
cggcagttcattgatgaagaacttgaaaagatggactgtgtacagcaacgcaagaagcag
ctagcagagttggagacatgggtaatacagaaagaaactgaagtcgctcatgtggaccag
ctctttgatgatgcatcaagggcagtgactaattgtgaatctttggtgaaggacttttac
tctaatctgggacttgaataccatgacagtagctctgaggatgaatcttcccagcccaca
gaaataattgagattcctgatgaagatgatgatgtcttaagtattgattcaggtgatgct
gggagtagaactcccaaagaccagaagcttcgtgaagctatggctgccttgagaaaatca
gctcaagatgtccagaaattcatggatgctgtcaataagaagagcagttcccaaggtctg
cataaaggaactttgagtcccatgtctggagaactgagcaaagatggtgacctgatagtc
agtatgcggattttgggcaagaagagaaccaagacatggcacaaaggcacccttattgct
atccagacagttggaccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctctatgtg
ggcagtcgcgtggtagccaagtacaaagatgggaatcaggtctggctttatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcatcctatgtcacacaatcagaactgtatccgatttgccggccattgaaaaagact
tgggaggacatagaagacatttcttgccgagacttcatagaagaatatattactgcctat
cccaaccgtcccatggtgctgctcaagagtggccagcttatcaagactgaatgggaaggc
acatggtggaaatcccgagttgaggaagtagatggcagcctagtcaagatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggttctacacggctagagccaatgttcagc
atgaaaacatcttcagcctctgcattggagaaaaaacaaggaggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcctgttgtccaatacacccaagacctgact
agtactggaacccaattcaagccaatggagcctccacaacccatagctccacctgttcca
cctgctccatctgctttacctgctccacctctgtccccccaagcaggtgacaatgaaagc
ttggaaagccagcttgctcagtcacggaagcaggtggccaaaaagagcacatcatgtcga
ccaggatctgtgggctctggtcattcctctcctacatctcctccactcaatgaaaatgcc
tctggcgggaaatctgggattaaccagacatacagatcacctttgggctcaacaacctct
gcaccagcactctcagctcctcagttgcctccagtcagtgatgaattaccaatagtctca
acaacctctgctccagcacccccagctccttctgggcctccagccccaccagccttccat
ggcatgttggagcgggcccctgcagagccctcctaccgtgccccaatggagaagcttttc
tacttacctcatgtttgtagctatacttgtctgtctcggatcagacctatgaggaatgag
cagtaccgaggcaagaaccctctgttagttccactattgtatgacttccggaggatgacg
gctcgacgcagagtcaaccgcaagatgggctttcatgttatctataagacaccctgtggc
ctctgccttcggacaatgcaggagattgaacgatacctatttgaaactggctgtgacttc
cttttcctggagatgttttgtttggatccttatgttcttgtggacagaaagtttcaaccc
tataaaccgttttactatattttggatatcacctatggaaaagaagatgttcctctgtcc
tgtgttaatgaaattgacacaacccccccaccccaggtcgcctacagcaaagagcgaatc
cccggcaagggtgttttcattaatacaggccccgagtttctggttggctgtgactgcaag
gatgggtgtcgggacaagtcgaaatgtgcctgccatcaactcactattcaggctacggcc
tgtaccccagggggccaaatcaaccctaattctggctaccagtacaagagattagaagag
tgtctgcctacaggggtttatgagtgtaacaaacgctgcaaatgtgacccaaacatgtgc
acaaatcggttggtacagcatggactacaggttcgactacagctatttaaaacacagaac
aagggctggggtatccgctgcttggatgacattgccagaggctcttttgtctgtatttat
gcaggcaaaatcctgacagatgactttgcagacaaagaaggcctggaaatgggtgatgag
tactttgcaaatctggatcatattgagagtgtagagaacttcaaagaaggatatgaaagc
gatataccctgttcctctgacagcagtggtgttgacatgaaggaccaggaagatggcaat
agtggtacagaggaccccgaagagtccaatgatgatagctcagatgataacttctgtaag
gatgaggacttcagcaccagctcagtgtggcgtagctatgctacccggaggcagacccga
ggccaaaaagagaatggacccactgaaacagcttccaaggactcacgccccccagacctt
ggacccccacatattcctatccctccttcaatctctgtagggggctgcaatccaccttcc
tctgaagagacacccaagaataaggtagcctcgtggttgagctgcaatagtgtcagtgaa
ggtggctttgctgactctgatagtcgttcatcctttaagactaatgaagttggggagggt
cggagtggaggaggccgaggggaggctgagaagatctccacttcagtactgggcatgaaa
gatgaaggagacatcaagcaggccaaaaaagaggatcctgatgatcgaaacaaggtgtca
gtagttactgaaagttctcggaattatggttataatcctcatgtgaagccagaaggactt
cgccgtccatctagtaagactaatatgcatcagagtcggcgactcatggcctctgcccat
gccaaccctgatgatgtcctgacactctccagcagcacagaaagtgagggggaaagtggc
accagccgcaagcccactgcggggcagacttcaaacgcagcagttgacagtgatgatatc
caaaccatctcctctggctcagaaggggaggactttgaggacaagaagaacatgtctggt
ccaacaaagcgccaggtggcagttaaatcaacccgaggcttcgctcttaaatcaacccat
gggattgccattaagtcaaccaacatggcctctgtggacaagggagagagtgcacctgtt
cgaaagaacacacgccaattctatgatggtgaagagtcttgctacatcattgatgccaag
ctggaaggcaacctgggtcgctacctcaatcacagttgcagtcccaacctgtttgtccag
aatgtctttgtggatacccacgatcttcgcttcccctgggtggccttctttgccagcaag
agaatccgagctgggacagaacttacttgggactacaactatgaagtgggtagtgtggaa
ggcaaggagctgctctgctgctgtggagccattgaatgcagaggccggcttctttag
DBGET
integrated database retrieval system
