KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138828181
Entry
138828181         CDS       T11079                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO alpha chain
  KO
K06752  MHC class II antigen
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04145  Phagosome
dmer04514  Cell adhesion molecules
dmer04612  Antigen processing and presentation
dmer04640  Hematopoietic cell lineage
dmer04658  Th1 and Th2 cell differentiation
dmer04659  Th17 cell differentiation
dmer04672  Intestinal immune network for IgA production
dmer04940  Type I diabetes mellitus
dmer05140  Leishmaniasis
dmer05145  Toxoplasmosis
dmer05150  Staphylococcus aureus infection
dmer05152  Tuberculosis
dmer05164  Influenza A
dmer05166  Human T-cell leukemia virus 1 infection
dmer05168  Herpes simplex virus 1 infection
dmer05169  Epstein-Barr virus infection
dmer05310  Asthma
dmer05320  Autoimmune thyroid disease
dmer05321  Inflammatory bowel disease
dmer05322  Systemic lupus erythematosus
dmer05323  Rheumatoid arthritis
dmer05330  Allograft rejection
dmer05332  Graft-versus-host disease
dmer05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    138828181
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138828181
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    138828181
   04612 Antigen processing and presentation
    138828181
   04658 Th1 and Th2 cell differentiation
    138828181
   04659 Th17 cell differentiation
    138828181
   04672 Intestinal immune network for IgA production
    138828181
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    138828181
   05164 Influenza A
    138828181
   05168 Herpes simplex virus 1 infection
    138828181
   05169 Epstein-Barr virus infection
    138828181
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    138828181
   05152 Tuberculosis
    138828181
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    138828181
   05140 Leishmaniasis
    138828181
  09163 Immune disease
   05310 Asthma
    138828181
   05322 Systemic lupus erythematosus
    138828181
   05323 Rheumatoid arthritis
    138828181
   05320 Autoimmune thyroid disease
    138828181
   05321 Inflammatory bowel disease
    138828181
   05330 Allograft rejection
    138828181
   05332 Graft-versus-host disease
    138828181
  09166 Cardiovascular disease
   05416 Viral myocarditis
    138828181
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    138828181
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dmer04147]
    138828181
Exosome [BR:dmer04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138828181
  Exosomal proteins of epithelial cells
   138828181
  Exosomal proteins of breast milk
   138828181
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 C2-set_2 Ig_2
Other DBs
NCBI-GeneID: 138828181
NCBI-ProteinID: XP_069880112
LinkDB
Position
Unknown
AA seq 246 aa
MALSVGLIPGLFMLITFLSPQEAGVITADHMGSYGPAFYQSYGASGQFAHEFDGEQLFSV
DWKNREAVWRLPEFGDFMNFDPQGGLSSIAMIKVHLDTLVERSNRTRAISVPPRVTVLPK
FRVELGKPNLLICIVDNIFPPVIDITWLRNGQAITEGVAQTSFYSQPDHLFRKFHYLTFV
PSSEDVYDCKVEHWGLNKPLLKHWEPQVSTQPPDTMETLVFALGLAIGFMGFLMGTILII
FRHHYG
NT seq 741 nt   +upstreamnt  +downstreamnt
atggccctctctgtgggtttgatcccaggactgttcatgctgataactttcctgagcccc
caggaagctggggtcatcacagctgatcacatgggctcctatggaccagctttctaccag
tcttacggtgcctcaggccagtttgcccatgaatttgatggcgaacaactgttctctgtg
gactggaagaatagagaggcagtgtggcggttgcctgagtttggtgacttcatgaacttc
gacccacagggtgggctgagcagcattgccatgatcaaagtccatctggataccttagtg
gaacgctccaacagaaccagagccatcagtgtgcctccacgggtgaccgttcttcccaag
tttcgagtggaactgggcaagcccaatcttctcatctgcattgtggacaacatcttcccc
cctgtgatcgacatcacctggctgcgcaatggtcaagccatcaccgagggagtggcccag
accagcttctattctcagcctgaccacttgttccgaaagttccattacttgaccttcgtg
ccctcatcggaggacgtctatgactgcaaggtggagcactggggcctgaacaagcctctc
ctcaagcactgggagcctcaggtgtctacccaacccccagataccatggagaccttggta
tttgccctaggcttggccattggctttatgggcttcctcatgggtaccatcctcatcatc
ttcaggcaccactatggctga

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