Dipodomys merriami (Merriam's kangaroo rat): 138830878
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Entry
138830878 CDS
T11079
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmer04040
]
138830878 (Scn4a)
Ion channels [BR:
dmer04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138830878 (Scn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
138830878
NCBI-ProteinID:
XP_069883859
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MASTSLPNLVPIGPDCLRPFTRESLAAIEQRAVEEEARLQRNKQMEIVEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYILSPFSII
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTTWFSNDT
WYGNDTWYGNDTWNSHESWASNSTFDWDAYISDKDNFYFLEGSNDALLCGNSSDAGHCPE
GYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVII
FLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAKAAQAL
ESGEGNGDQAHSKDCNGSLDTSAGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKC
SHKVLIWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLS
VGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSF
RLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVC
KIASDCNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNL
VVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKVLSP
KDIMLSLGEPGGTGEAGEAGDSAPEDEKKELPPDEGDKDLKKNNHILNHVGLANGTPTSI
ELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKKPPPPLYDGNSSVCST
ADYKPPEEDPEEQAEENPEGEQPEECFTEACVQRCPCLYVDISQGRGKMWWTLRRACFKI
VEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIVEMLLKWVAY
GFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMR
VVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEVNNKS
QCESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEV
NLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPQNKIQGIVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYN
INMVFIIIFTGECVLKMFALRHYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLF
RVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYV
KKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTHIKGD
CGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKF
DPDATQFIDYNRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEV
LGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSV
KQASYLYRHSQDGSADEAPEKEGLIASAMNKMYGRENGGHFSVHSQGEEEGSTGAEGPPA
GLTPVSPSDPAPPPAPPAPPPGQTVRPGVKESLV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggctagcacatccctgcccaacctggtgcccattggcccagattgcttgcgccccttc
acccgggagtccctggcagccatagaacagcgggcagtggaggaggaggcccggctgcag
cggaacaagcagatggaaatagtggagccagagcggaagccacgcagtgacctagaagct
ggcaagaatctgcctctcatctatggggaccccccaccggaagtcattggcatccccctg
gaggacttggacccctactacagtgacaaaaagaccttcatcgtgctcaacaagggcaag
tctatctttcgcttctctgccacgcctgcgctatacatcctgagccccttcagcatcatc
aggcgtggtgccatcaaggtgcttatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtgacccgccaccctggtccaaggatgtg
gagtacaccttcacagggatctacacgtttgagtccctcatcaagatgctagcccggggc
ttctgcattgatgacttcacattcctgagggacccctggaattggctggacttcagtgtc
atcatgatggcgtatctgacagagttcgtggacctgggaaacatctcagccctgagaacc
ttccgggtactgcgggccctgaaaaccatcactgtcatcccagggctgaagaccattgtg
ggggccctgatccagtcagtgaaaaagctgtccgacgtgatgatcctcaccgtcttttgc
ctaagtgtctttgccctggtgggactgcagctgttcatggggaacctccgtcagaagtgt
gtgcgctggcccccacccttcaacgacaccaacactaccacatggttcagcaacgacacg
tggtatggcaacgacacgtggtatggcaatgacacatggaacagccacgagagctgggcc
agcaactccacttttgactgggatgcctacatcagtgacaaagataacttctatttcctg
gagggttccaatgatgccctgctctgtgggaacagcagtgatgctgggcactgccctgag
gggtatgaatgcatgaaggctggccggaaccccaactatggctacaccagctacgacacc
ttcagctgggccttcctggctctcttccgcctcatgacccaggactactgggagaacctc
ttccagctgacccttcgagcagctggcaagacctacatgatcttctttgtggttatcatc
tttctcggctccttctacctcatcaatctgatcctggcagtggtggccatggcctatgca
gagcagaatgaggccaccctggcggaggaccaggagaaagaggaagagtttcagcagatg
cttgagaaattcaaaaagcaccaggaagagctggagaaggccaaggctgcccaggctctg
gaaagtggagagggaaatggggaccaggcccacagcaaagactgcaatggcagcctggac
acgtcagcgggggagaaggggcccccgaggcctagctgcagtgcagacagtgccatctct
gatgctatggaagagctggaagaggcccaccagaagtgcccaccttggtggtacaagtgc
tcacacaaagtgctcatatggaactgctgtgccccatgggtaaagttcaagcacataatc
cacctgatcgtcatggaccctttcgtggacctgggcatcaccatctgcatcgtgctcaac
accctcttcatggccatggagcattaccccatgacagagcactttgacaacgtgctctct
gttggcaacctggtcttcactggcatcttcactgcagagatggtgctgaagctgatcgcc
atggatccctatgagtatttccagcagggctggaacatctttgacagcatcattgtcacc
ctcagcctggtggagctgggcctggccaatgtgcaggggctgtcggtgcttcgctccttc
cgtctgctgcgggtcttcaagctagccaagtcatggccaacgctcaacatgctcatcaag
atcatcggcaactcggtgggggcgctgggcaacctgacattggtgctggccatcattgtg
ttcatctttgctgtggtgggcatgcagctgtttggcaagagctacaaggagtgtgtgtgc
aagatcgcctcagactgcaacctgccccgctggcatatgcatgactttttccactccttc
ctcatcgtcttccgcatcctgtgtggggaatggatcgagaccatgtgggactgcatggag
gtggccggccaggccatgtgtctcacagtcttcctcatggtcatggtcatcggcaacctg
gtggtcctgaacctgttcctggctctcctgctgagctccttcagcgctgatagcctagca
gcctcggatgaagatggcgagatgaacaacctacagatcgccatcgggcgcatcaagtgg
ggtattggcttcgccaaggccttcctcctggggctgctgcatggcaaggtcctgagcccc
aaggacataatgctgagccttggggagcctgggggcactggagaggctggagaagctggg
gacagtgcccctgaggatgagaagaaagagctgccacccgatgagggggacaaggacctg
aagaagaacaatcacatcctcaaccatgtgggcctggctaacggcacacctaccagcatc
gagctggaccacctcaacttcatcaataacccttatctgactatccaggtgcccattgcc
tccgaggagtcagatctggagatgcccactgaggaggagactgacacattctcagagcct
gaggacatcaagaagccgcctccacccctctatgatgggaactcctccgtctgcagcaca
gctgactacaagccccccgaggaagaccctgaggagcaggccgaggagaaccccgaggga
gagcagcctgaggagtgcttcactgaagcttgtgtgcagcgatgtccctgcctctatgtg
gacatctcccagggccgtgggaagatgtggtggacccttcgcagggcctgcttcaagatt
gttgagcacaactggtttgagaccttcattgtcttcatgattctgctcagcagtggggct
ctagccttcgaggacatctatatcgagcagcggcgtgtcatccgcaccatcctggaatac
gcggacaaggtcttcacctacatcttcattgtggagatgctgctcaagtgggtggcgtac
ggcttcaaggtgtacttcaccaacgcctggtgctggcttgacttcctcatcgtggatgtc
tccatcatcagcctggtagccaactggctgggctattcggagctgggacccatcaaatct
ctgcgcacactgagggccctgcgtcccctgagagcgctgtctcgatttgagggcatgagg
gtggtcgtgaacgccctcttgggagccatcccctccatcatgaacgtgttgctggtgtgc
ctcatcttctggcttatcttcagcatcatgggcgtcaacctgtttgctggaaagttctac
tactgcatcaacaccaccacctcagagaggttcgacatctcggaggtcaacaacaagtcg
cagtgtgaaagcctcatgcacacaggccaggtccgctggctcaatgtcaaggtcaactac
gacaacgtgggtctgggctacctctcgctcctgcaggtggccaccttcaagggctggatg
gacatcatgtatgcagctgtggactctcgagagaaggaggagcagccgcagtatgaggtg
aacctctacatgtacctctacttcgtcatcttcatcatcttcgggtccttcttcacgctc
aacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaagaagtttggagga
aaagacatcttcatgacagaagaacagaagaaatactataatgccatgaagaagcttggc
tccaagaagccccagaagccaatcccccggccccagaacaaaatccagggcatagtgtac
gactttgtgacgaagcaggtattcgacatcaccatcatgatcctcatctgcctcaacatg
gtcaccatgatggtcgagacggacgaccagagccagctcaaggtggacatcctgtacaat
atcaacatggtcttcatcatcatcttcaccggggagtgcgtgctcaagatgtttgcgctg
cgccactactacttcactgtcggctggaacatcttcgactttgtggtggtcatcctgtcc
atcgtaggcctcgcgctctccgatctgatacagaaatacttcgtgtctcccacgctgttc
cgtgtgatccgtctggctcggattggacgtgtcctgcggctgatccgtggggctaagggc
atccggacgctgctcttcgccctcatgatgtctctgcctgccctcttcaacattggcctc
ctcctcttccttgtcatgttcatctactctatctttggcatgtccaacttcgcctatgtc
aagaaagagtcgggcatcgacgacatgttcaacttcgagaccttcggcaacagcatcatc
tgtctttttgagatcaccacgtcggctggctgggatgggcttctgaaccccatcctcaac
agtgggcccccagactgtgaccccaccctggagaacccaggcacccatatcaagggtgac
tgtggcaatccatccatcggcatctgcttcttctgcagctacatcatcatctccttcctc
atcgtggtcaacatgtacattgccatcatcctggagaacttcaatgtggccacggaggag
agcagcgagcccctgtgtgaggatgactttgagatgttttatgagacgtgggagaagttt
gacccggatgccacccagttcatcgattacaaccgcctctctgacttcgtggacaccctg
caggagccactgaagattgccaagcccaacaagatcaagctcatcacactggatctgccc
atggtgccaggggataagatccactgcctggacatcctctttgccctcaccaaagaggtg
ctgggcgactctggggaaatggatgccctcaagcagacaatggaggagaagttcatggcg
gccaatccttccaaggtctcctacgagcccatcaccaccaccctcaagaggaagcaggag
gaggtgtgtgccatcaagatccagagggcctaccgccggcatctgctgcagcgctctgtg
aagcaggcgtcctacctgtaccgccacagccaggatggcagtgcggatgaggccccagag
aaggaaggacttatcgccagtgccatgaacaagatgtatggccgtgagaacggaggccac
ttcagtgtccacagtcagggggaggaggaaggctctacaggggctgagggaccccccgcg
gggctcacacctgtcagcccctcagatcctgccccaccccctgccccccctgccccccca
ccaggacagacagtgcgcccaggggtcaaagagtctcttgtctag
DBGET
integrated database retrieval system
