Dipodomys merriami (Merriam's kangaroo rat): 138835771
Help
Entry
138835771 CDS
T11079
Symbol
Dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138835771 (Dhx9)
03012 Translation factors [BR:
dmer03012
]
138835771 (Dhx9)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138835771 (Dhx9)
5.6.2.6 RNA 3'-5' helicase
138835771 (Dhx9)
Spliceosome [BR:
dmer03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138835771 (Dhx9)
Translation factors [BR:
dmer03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138835771 (Dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
ResIII
AAA_19
AAA_14
ATPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
138835771
NCBI-ProteinID:
XP_069890404
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIAPPPAVTETTDTTANTNKEDGQTTMGGPLPPHLAL
KAAGENNSETEDSDFGGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWTLE
NAKARLNQYFQKENIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAA
QSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSQDLELQLQNVVQELNLDIVP
PPVDPTMPVQLNMGKLAQFEPSQRQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAFATPEQ
ISTDLKNELMYQMEQDHNLQAVLQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTT
QVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESIL
PRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRI
VLMSATIDTTMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTQFIPPPKDKKKKDKEDD
GGEDDDANCNLICGDEYGPETKMSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG
WNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETS
ITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR
ARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL
DALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFINEGKR
LGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQ
LKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRN
ALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDG
QIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNMIRQIS
RPSAAGINLMIGGARYGDGPRPPKMARYDNGSGYRRGSGYGGGGYGGGGYGGGGYGGGGY
GSGGYGGGGFGGGGGGFGGSGGGFGGGGFGGGGFGGGSGGGFGGGSGGGFGGNYGGGGGF
GGNDGGFGGNGGGFGGNGGGFGGGGGFGGRNYGGGGGYGGGSNSYRGGYGGGGGGFRGGS
QGGYRGGFGGDYRGSGGDYRGSGGGGYRGSGGFQRGGGRGNYGGGYFGQGRGGGGY
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattaaaaattttctgtatgcctggtgtggcaaaaggaagatgactccatcg
tatgagattagagcagtggggaataaaaacaggcagaagttcatgtgtgaggtgcgggta
gaagggtataattatgctggcatgggcaattccaccaataaaaaagatgcacagagcaat
gctgccagagactttgttaactatttggttcgaattaatgaagtaaagagtgaagaagtc
ccagctgttgggattgcacctccgcctgcagttactgaaacaactgacaccacagcaaat
actaataaggaagatggacaaacaaccatgggaggacctcttcctccacacctggctctc
aaggcagcaggagaaaataattctgaaactgaggattctgacttcggtggtcccacctgg
gatcggggagccaacttaaaggattactactcaagaaaggaggagcaagaagtgcaagcg
actttagagtcagaagaagtggatttaaatgctgggcttcatggaaactggaccttggaa
aatgctaaggctcgtctgaaccagtatttccaaaaagaaaatatccaaggagaatataag
tacacccaagtgggtccagatcacaacaggagctttatcgcagaaatgaccatttatatc
aagcagctgggcagacgtatttttgcacgtgaacatggatcaaataagaagttggcagca
cagtcctgtgctctatcacttgttagacaactctaccatcttggagtgattgaagcttat
tctggactgacaaagaaaaaagaaggagagagagtggagccttacaaagttttcctctct
caagatttagagcttcaactgcaaaatgttgttcaagagctgaatcttgacattgtgccc
ccgcctgttgatcctactatgccagtccaactcaacatgggaaaattagctcagtttgaa
ccatcacagaggcaaaatcaagtaggtgtggttccttggtcacctccacagtccaactgg
aatccttggactagcagcaacattgatgaggggcctttggcttttgcaactccagaacaa
ataagcacagatctcaagaatgaattaatgtaccagatggaacaagatcataatttgcaa
gctgtcttacaggaaagagagttactgcctgtgaagaaatttgaaagtgaaatcctggaa
gcaattagtcaaaattcagtagttattatccggggggctactggatgtggcaaaaccaca
caggttccacagttcattttagatgactttattcagaacgaccgagctgcagaatgtaat
attgtagtaactcagcccaggagaatcagtgcagtctctgtggcagagcgagttgcatat
gagagaggtgaagaacctggaaaaagctgtggttatagtgttcggtttgaatctatactt
ccacgtcctcatgcaagcataatgttttgtactgtaggtgtgctcctaagaaaactagaa
gcaggcatccgaggcatcagtcatgtaatagtggatgaaatacatgaaagagacattaat
actgatttccttctggtagtactgcgtgatgtagttctggcttatcctgaagttcgaatt
gttcttatgtctgctactatcgatactaccatgttttgtgaatatttcttcaattgtccc
atcattgaagtttatgggcggacttacccggttcaagaatattttctggaagactgcatt
cagatgacccaatttattcctccaccaaaggataagaaaaagaaggacaaagaagatgat
ggtggtgaggatgatgatgcaaattgcaacctgatatgtggggatgaatatggtccagaa
acaaagatgagcatgtcgcagctgaatgaaaaagaaactccatttgagctcattgaagct
ctacttaaatacatagaaactcttaatgtacccggagctgtgttggtttttttgcctggc
tggaatttgatatataccatgcagaagcatttggaaatgaacccacattttggaagccac
aggtatcagattctacctctacattctcagattccccgagaagaacaacggaaagtattt
gatccagtaccagttggagtaaccaaggttattttgtctacaaatattgctgaaacaagt
atcaccataaatgatgttgtttatgtcattgactcttgcaagcagaaagtgaaactgttt
actgctcataacaacatgaccaactatgctacagtatgggcatctaaaacaaaccttgaa
cagaggaaaggtagagctggtcgtgtacgtcctgggttttgctttcatctttgtagtcga
gctcgttttgagagacttgaaacccacatgacaccagagatgtttcgcacaccattgcat
gaaattgctttgagcataaaactactgcgtctcggaggaattggtcaattcctagccaag
gcaattgaacccccacctttggatgcagtgattgaagcagagcatactctcagagaactt
gatgcattagatgccaatgatgaattaacccctctgggacgaatccttgctaaactcccc
attgagcctcgttttggcaaaatgatgataatgggatgtattttctatgtgggagatgct
gtctgtaccatttctgctgctacctgctttccagaacctttcataaatgaaggaaagcga
ctgggctatgtccacaggaactttgctggaaaccgattttctgatcatgtggctctttta
tcagtgttccaagcctgggatgatgctagaatgggtggtgaggaagcagagatacgtttt
tgtgaacacaaaagacttaatatggctacactaagaatgacttgggaggcgaaagttcag
ctgaaagaaattctgattaattctggttttcctgaagattgtttgttgactcaagtgttc
accaacactggaccagataataatttggatgttgtaatctctctcctggcctttggtgta
tatcccaatgtatgctatcataaggaaaagagaaagattcttaccactgaagggcgtaat
gcccttatccacaagtcatcagttaattgtcctttcagcagccaagacatgaagtaccca
tctcccttctttgtgtttggtgaaaagattcgaacccgagccatctctgctaaaggcatg
accttagtcacccccttgcagttgcttctcttcgcctccaaaaaagtccaatctgatggg
cagattgtctttatagatgactggatcagactgcaaatatcacatgaagctgctgcatgt
atcactgccctccgtgcagccatggaagctctggttgttgaagtatccaaacaacctaat
atcatcagccagttggaccctgtaaatgaacatatgctgaacatgatccgccagatttct
aggccctctgccgctggtataaaccttatgattggtggtgcacgatatggagatggtcca
cgtcctcccaagatggccagatatgataatggaagtggatatcgaaggggttctggatat
ggtggtggaggctatggcggtgggggatatggtggtggaggctatggcggtgggggatat
ggtagtgggggctatggtggtgggggctttggtggaggtggtgggggctttggaggaagt
ggaggtggcttcggtggtggaggctttggcggtggaggctttggcggtggaagtggtgga
ggatttggaggtggaagtggagggggctttggaggaaactatggaggtggcggaggcttt
ggaggaaatgatggtggctttggaggcaacggaggaggttttggagggaatggcggaggt
tttggaggtggtggaggttttggcggtagaaactatggaggtggtggaggttatggtggt
ggctccaactcttaccggggaggatatggtggaggtggaggtggttttagaggaggctca
caaggggggtatagaggtggctttggtggggactacagaggatctggtggagactacaga
ggatctggaggaggaggctacagaggatctggaggattccagcgaggcggtggccggggc
aactatgggggaggctacttcggacaagggagaggaggcggtggttattaa
DBGET
integrated database retrieval system
