Dipodomys merriami (Merriam's kangaroo rat): 138840121
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Entry
138840121 CDS
T11079
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5 isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04360
Axon guidance
dmer04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
138840121 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
138840121 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmer01009
]
138840121 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmer04040
]
138840121 (Trpc5)
Protein phosphatases and associated proteins [BR:
dmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138840121 (Trpc5)
Ion channels [BR:
dmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138840121 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
138840121
NCBI-ProteinID:
XP_069895991
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPPKRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRSSSAQGKSKAESSSKRSFMG
PSFKKLGLLFSKFNGHMSEPSSEPMYTISDGLVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVRGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaagaaggtcaattactcaccatatagagatcgcatccccctg
caaatcgtgagggctgagacggagctctctgcagaggagaaggccttcctcaatgccgta
gagaagggagactatgccactgtgaagcaggccctgcaggaggctgaaatctactacaat
gtcaacatcaactgtatggatcctctgggccgaagtgccctacttattgccattgaaaat
gagaacttggagatcatggagctactgctgaaccacagcgtgtatgtgggcgatgcatta
ctctatgccatccgcaaggaagtggtgggggctgtggagcttctactcagctacagaaag
cccagtggagagaagcaggtccccactctgatgatggacactcaattctcagaattcaca
ccagacatcactcccatcatgctggccgcccataccaacaactatgaaattatcaaattg
cttgtccaaaaacgggtcactattccacggccccaccagatccgctgcaactgtgtggag
tgtgtgtccagttcagaagtggacagcctgcgtcactcccgctccagactgaacatttac
aaggctctggcaagcccctcactcattgccttatcaagtgaggaccccattctaacagct
ttccgtctaggctgggagctcaaagagctcagcaaggtggagaatgagttcaaggctgaa
tatgaggagctctcccagcaatgcaagctttttgctaaagatctgttggaccaagctcga
agttctcgggaactggagatcatcctcaatcatcgagatgaccacagtgaagagcttgac
cctcagaaataccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcaacccaattgccaacagttacttgccaccctgtggtatgatggcttccct
ggatggcggcgtaaacactgggtagtcaaacttctgacctgcatgaccattgggttcctg
tttcctatgctatctatcgcctatctaatctcacccaggagcaaccttgggttgttcatc
aagaaaccttttatcaagttcatctgccacacagcatcctatttgaccttcctcttcatg
cttctcctggcttctcaacacatcgtcaggacagacctccatgtgcaaggacctccgcca
actgttgtagaatggatgatactgccttgggttctaggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacttgatggatttt
gcaatgaattccctgtacctggcaacgatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccaactttgattgcagaggca
ctcttcgccatatccaacattttgagttccttgcgtctcatatccttgttcacagccaat
tcccacttagggcctctacagatctctttgggacgcatgctgcttgatatactcaaattc
ctctttatctactgtctggtactactggcttttgcgaatggactgaaccagctttacttt
tattatgagaccagagctatcgatgagcctaacaactgcaaagggatccggtgtgagaaa
cagaacaatgccttctccacgctttttgaaacccttcagtcactcttctggtctgtattt
ggacttttaaatctctatgtcaccaacgtgaaagccagacatgagttcactgagtttgtt
ggagctaccatgtttggaacatacaatgtcatctccctggtagttctgttgaacatgctg
attgctatgatgaacaactcctaccagcttattgctgaccatgctgatattgaatggaag
tttgcaagaacgaagctttggatgagttattttgatgaaggtggtactttgccacctcct
tttaacatcatccccagtcccaaatcatttctctatcttggtaactggttcaacaatact
ttctgccccaaaagagatcctgacggtagacggagaaggcacaatttgagaagcttcaca
gagcgccatgcagacagcctgatacaaaatcaacattatcaggaagttatcaggaactta
gtcaaaagatatgtggctgcgatgataagaaattccaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaagacatctccagctttcgatacgaagtgcttgatctc
ttaggaaatagaaagcccccaaagagaagcttttccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttt
aatttaggctgcaaaaaaaaggcctgtcatgggccccctctcatcagaaccatgccaaga
tccagcagtgcccaaggaaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccttctttcaagaaactgggtctcttattctccaagtttaatggtcatatgtctgagccc
agttcagagccaatgtacacaatttctgatggactcgttcagcagcactatatgtggcag
gacatcagatattctcaaatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagtccggggcgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctctgaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgacggacaggaagaacaagttacaactcggctctaa
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integrated database retrieval system
