KEGG   Daphnia magna (water flea): 116916389
Entry
116916389         CDS       T07514                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116916389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116916389
   03041 Spliceosome [BR:dmk03041]
    116916389
   03032 DNA replication proteins [BR:dmk03032]
    116916389
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     116916389
Spliceosome [BR:dmk03041]
 Complex A
  U1 snRNP components
   Sm proteins
    116916389
  U2 snRNP components
    116916389
 Complex B
  U1 snRNP components
    116916389
  U4/U6.U5 tri-snRNP components
    116916389
 Complex C
  U2 snRNP components
    116916389
DNA replication proteins [BR:dmk03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     116916389
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 116916389
NCBI-ProteinID: XP_032777527
LinkDB
Position
LG1:13342493..13343848
AA seq 234 aa
MTISKNNKMVQHLNYRVRVTLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKAKINKSGV
GATEREEKRVLGLVLLRGENIVSMTVEGPPPTEESMPRVPMPGVVPGPGVGRAAGRGVPV
NAPMGAPAGLQGPVRGVGGPAPQMMVPGGRGAGGPAVSAPPQMRPQVPAPPMGARPGMPP
MGMAPPPGMMGGPPPGMMGMPPGMMGRGAPPGAPPGMRPPPPGMMRGGPPGRPF
NT seq 705 nt   +upstreamnt  +downstreamnt
atgacgatcagtaaaaacaacaaaatggttcagcacttgaactatcgagtgagagtgaca
cttcaagattccagaacttttattggtacattcaaagcatttgacaaacatatgaatctg
attttgggagactgtgaagaattccgtaaaattaaagccaagattaacaagtcaggagta
ggtgctacagaaagagaagagaagagagtgcttggactagtattacttcgaggtgaaaac
attgtgtcaatgacagttgaggggcctcctcctacggaagaaagcatgcccagagtacct
atgccaggagttgttccaggacctggcgttggcagagctgctggacgaggagtacctgtc
aatgcaccgatgggagcccctgccggacttcaaggtccagtaagaggggtgggtggacct
gcacctcaaatgatggttccaggtggcagaggggcgggtgggccagcagtatcagcacca
ccacagatgagacctcaggttcctgcacctccgatgggtgctcgccctggtatgcctcca
atgggcatggctcctcctcccggcatgatgggtggaccacctcccggtatgatgggaatg
ccaccaggaatgatgggtcgcggtgcccctcctggcgcaccaccaggcatgcgtccacca
ccacctggcatgatgagaggaggtccaccgggaaggcccttctaa

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