Daphnia magna (water flea): 116918971
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Entry
116918971 CDS
T07514
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116918971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116918971
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
116918971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Translat_reg
Motif
Other DBs
NCBI-GeneID:
116918971
NCBI-ProteinID:
XP_045027025
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Position
LG3:2874204..2901298
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AA seq
1300 aa
AA seq
DB search
MTSDDLLMESVPMDRLSSCSLDSVIGYLDQLLARNKETVDGVVMRSASPTQREPKDETDG
RKTLSPSSDRVRSNFADEEEECIQRVMDLSFASVYEMPASSNVGHSMMPVRSVIGCQKVM
TVLSESLDPPESLDSGVESNKSDDECQTNGSHSPVACASLGDKGRNYAIPLHQHDYQNLI
SCSPLQQRRPARRNHSLALSNCRTSRTNRNRQDGGRDHIPNVGRHDKKTMKEDKFYEICL
GHLCWQMEAGNSAAGTGLGFDRWISIFSLQKHQDELIQLSANPSSPSASSPANHRKHSHH
QPQSHQPGGKRQSQRHHSTGGISSRQGSQENNNSNNGRSSSTSGGLGIPSREPSLADANI
NSSKSPSSPQRQERNPSVVSATAVDGGATTASGNGRSNPSPPSNAQQTTAPAGQPTGQTG
PNSNQIAQLTLSPSERAMMMGKVLKTLIMAASSASPASALIRDRKVPGRGTVRHCLVGTE
MVDWLLGLSPEVHSRAQASAMWQVLLDEQVILALSKEHQFKDKFVFYRFHEDAEGRGDGP
AGRKPSQDVVRDAQQKKDEVISTLTQLAPDAVLKAILRKPTHDRSPDDLEIIYEELVHIR
ALSHLSTTVKRELANIIVFESHPRAETVLFNQGDEGVSWYVILKGSVNVVIHGKGVVTTL
QDGDDFGQLALINNAPRAATIITREDGCQFLRVDKDDFNRILRDVEANTVRLKEHGRDVL
VLEKVSANPSAAHRHSASSHYKYTVMAGMPQKMLEHLLETRLDARHLSVRDEDIIRPYSS
ATDMFLDDFLLTHIMFMPTHQLITELMRNYRIESPTQDKEFVVASKSRVVNFVYQWVTSI
RDPVFDETITHSFFEQLHSEVHADARLYHTLREEAAMLDHVQELLGEYRAARQQGGSLAT
LTWTLPAGGQSVVLFSAVNAAATAAAAAGNRKNSGESNAASAFSAEKRRPIRADDDIIFR
VYCADHTYCTLRQPVNATAETIKLNAADKLGLRHEELVLAEIKSNGEKSVISDTEVSIAT
CLSINGRIFVSPKDHLDAMTVLPDQEGPSDGTCNELEMFSTRELAYYITLIDWDLFCSVH
EYELLYHVAGAQPFRKIKSNLDLFLRRFNEIQYWVVTEICLANTLGKRVQLLRKFIKLAA
YCKEFQNLNAFFALVMGLSNVAVSRLTQTWERLPSKLRKMFNEFDGLIEPSRNHRAYRIA
VGKLQPPILPFMPLLLKDMTFTHEGNRTLLDSAGLINFEKMHMLAQTMRTLRYCRSRQLL
LQPPTPRSEQEVRNYIRNLRVIDNQRILTGLSQRLEPKRA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgacgatttattgatggagtcggtcccgatggaccggctgtccagttgttca
ctggacagcgtcatcggctacttggatcaacttttggcaaggaataaagaaacagtcgat
ggggtggtgatgcgatctgcatctcccacgcagcgcgagccgaaggacgagaccgacggt
cggaagacgttgagcccttcatcggatcgcgttcgatccaatttcgcggacgaagaagaa
gaatgcatccagcgagtgatggacttgtcttttgcttccgtctacgaaatgcctgcgtca
tcgaatgtcggccattcgatgatgcccgtccgatcggttattggatgtcaaaaagtgatg
accgtcctcagcgagtcgctcgatccgcccgaatcgttggacagcggagtcgaaagtaac
aaatcggacgacgagtgtcagaccaatggcagccattcgcccgtcgcgtgcgccagtttg
ggcgataaaggtcgcaattacgccatcccgttgcatcaacacgattatcagaatttgatc
agttgctcgcctttgcagcagcgacggccggctcgccggaatcattcgctagctttgtcc
aactgtcgaacgagtcgaaccaatcgaaaccgtcaagatggtggccgcgatcacattccg
aacgttggccgtcacgacaagaaaacgatgaaagaggacaaattttacgagatctgtttg
ggtcatttgtgctggcaaatggaagccggaaacagcgccgccggaactggactcggtttt
gatcgatggatctccattttctcgttgcagaaacatcaggacgagttgattcaactgtcg
gccaatccttcgtctccatccgcttcgtcaccggccaatcaccgcaaacacagtcatcat
caaccgcagtctcatcagccaggtggcaaaaggcaatcgcaacgtcatcacagcaccggt
ggcatcagcagtcgtcaaggatcgcaagaaaacaacaactctaataacggaaggagtagt
tcgacgtccggcggattgggtatcccttctagggagccgtcgctggccgacgcgaatatc
aacagcagcaaatcgccgtcgtcgccacagcgtcaggagcgcaatccgtcggttgtcagc
gctacggcagtcgatggcggtgccacgacggccagcggaaacggacgcagcaatccttcg
ccaccgagcaacgctcagcaaacaacggcccctgccggccaaccgaccggccaaacggga
cccaacagcaatcaaatcgcccaacttactttgtcgcccagtgaacgcgccatgatgatg
ggcaaagttttgaaaacgctcatcatggcagcgtcttcggcgtcgcccgcctccgccctc
atccgtgaccgtaaagtacccggacgtggcaccgttcgtcactgcctggtcggcacggaa
atggtcgattggctgctcggcctcagtcccgaagtgcacagccgtgcccaagcgtccgcc
atgtggcaggtcttgctggacgagcaagtcatcctagccctgtcgaaggaacatcaattt
aaagacaagttcgtcttctaccgattccacgaagacgccgaggggcgaggagacggcccc
gctggtcgcaaaccgagtcaggacgtggtgcgcgacgcccaacagaagaaggacgaagtg
atctcgacgttgactcaactggcacccgatgccgtcctcaaagccatcctaagaaaaccg
actcacgaccggtcccccgacgatttggagatcatctacgaagagttggtgcacatcagg
gccctgtcgcatctgtcgaccaccgtcaaacgagagttggccaacataatcgtctttgaa
tcacatccacgagcagaaactgtcttgtttaatcaaggagacgaaggcgtgtcgtggtac
gttatactcaaaggctccgttaacgtcgtcatccatggcaagggcgttgtcacgacgctg
caagacggcgacgatttcggccagttggcgctcatcaacaacgcacccagagctgcgact
atcatcacgagggaagacggctgtcagttcctgcgcgtggacaaggacgattttaatcga
atcctgcgcgacgtcgaagccaacacggtccggctcaaggagcacggacgtgacgtcctc
gttttggagaaggtcagcgccaatccgagcgcagctcatcgacattccgcctcttcacac
tacaagtatacggtgatggcgggaatgccgcaaaagatgctggaacatttattggaaacg
cgtttggatgcgaggcatttgagcgtccgcgacgaggatatcatccgaccttattcgtct
gctacggacatgttcctcgacgacttcctgttgacgcacatcatgttcatgccgacgcac
cagctgatcacggagctgatgaggaactaccggatcgaatcgccaacgcaggacaaggaa
ttcgtcgtggccagcaaatcacgtgtcgttaatttcgtctaccagtgggtcaccagcatt
cgcgatccagtctttgacgagaccatcactcattctttcttcgagcaattgcacagcgaa
gtccacgctgatgcccggctttaccacacgttaagagaagaagctgccatgctggatcac
gttcaagagctgctaggagagtaccgtgcggccagacaacagggtggatcgttggcgacg
ttaacgtggacgttgcctgccggagggcaatcggtcgtcctgttttccgcggtcaacgcg
gcagccacagctgctgcagccgccggcaacagaaagaacagcggcgaatcgaacgcggcc
agtgcctttagtgcggaaaagagacgacccatccgcgctgatgacgacatcatcttccgc
gtgtactgcgccgaccatacatattgcacgttgcggcaacccgtcaacgccacggcagag
actattaaactcaacgccgccgacaagttaggcctacgccacgaggaacttgtgttagct
gaaatcaaatccaatggtgaaaagtccgtgattagcgataccgaggttagcattgccact
tgcttgtccatcaacggacgcatttttgtttcacccaaagaccacctcgacgccatgacg
gtgctgcccgaccaggaaggaccttccgacgggacatgtaacgagctggaaatgtttagc
acgcgagagttagcttattacatcaccctgatcgattgggatcttttctgttctgttcac
gagtatgagctgctgtatcacgttgccggagcacaacccttccgcaagatcaagtccaac
ctagatctatttttgcgccgtttcaatgaaatccagtactgggttgtcacggaaatttgc
ctggccaacacgttgggcaaaagagtccaactgttacgcaaattcatcaaattagccgct
tattgcaaagagttccagaacttgaacgctttctttgcgctcgtcatgggtctgagtaac
gtggccgtcagtcgtctgactcagacttgggaacgtcttccgtccaagttgaggaaaatg
tttaacgagtttgacggtttaatcgaaccatcacgcaatcaccgggcataccggatcgct
gtggggaaactccagccgcccattcttcccttcatgcctttacttttgaaagatatgacg
tttacgcacgagggtaatcggactctactcgacagcgccggattgatcaatttcgagaag
atgcacatgctggcccagacgatgcgaactctccgctactgccgaagtcggcaactactg
ctgcaaccgccaactccgcgtagcgaacaggaagtccgcaactacattcgtaatttgagg
gtcatcgataatcagcgcatcttgaccggcctctcacagcgactcgagccgaaacgggcc
tga
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