Daphnia magna (water flea): 116919626
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Entry
116919626 CDS
T07514
Name
(RefSeq) fringe glycosyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00514
Other types of O-glycan biosynthesis
dmk04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116919626
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116919626
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dmk01003
]
116919626
Enzymes [BR:
dmk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116919626
Glycosyltransferases [BR:
dmk01003
]
Glycan extension
O-Glycan
116919626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
116919626
NCBI-ProteinID:
XP_032781531
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All DBs
Position
LG3:6486957..6491636
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AA seq
378 aa
AA seq
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MSYQVSKMRLTLRRILQALFLALLFSFSTLAMLRTFAATSSRSATMMEHASAIKEEPPWI
KTFVGFWPDRSLRSVFDEEGKEFTAPVVDDNAIEFERAISTTTSTTTTATSKPQTSLDDI
FISVKTTKNFHATRLDVIIKTWFTLAREQTWFFTDSDDEEYSEKTHNHLINTGCSASHNR
MALCCKMAVEFDTFLESNKRWFCHFDDDNYVNVPQLVRMLQKHDWTDDWYLGKPSIKAPL
EILDREHMPQKISFWFATGGAGFCLSRSLGLKMKPLASGGKFISIGDKIRLPDDVTMGYI
VEHLLSKQLTVVEEFHSHLEPMKFLKQSHLAEQITFSYSHYGPEMNVLSLNGFNNQIDPY
RFLSLHCNLYPNFSFCPR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtttcgaaaatgcgtttaacgcttagaagaatcctgcaagccctgttt
ttagctttattattttcgttttcgacactggcaatgcttcggactttcgctgccacttca
agccgttctgcaacgatgatggagcatgcttctgcaataaaagaagaaccgccatggatc
aaaacttttgtgggattttggccagatcgatctctgagatctgtgtttgacgaagaagga
aaagagttcacggcgccagttgtagatgacaatgcgattgagttcgaaagagcaatatca
acaactacatccacgacgacgactgcgactagtaaaccacaaacgtcactagacgatatt
tttatcagtgtaaaaactaccaagaattttcacgccacacgactcgatgtcatcatcaag
acatggttcacacttgctcgcgaacagacttggttctttaccgactccgatgacgaagaa
tacagcgagaaaactcacaatcatttgatcaacactgggtgctcggcttcccacaatcgg
atggcattgtgttgcaaaatggctgttgagtttgacaccttcctcgagagcaacaaacgg
tggttttgtcattttgacgacgacaactacgtcaacgtaccccaattggttcgcatgcta
caaaagcacgactggacggacgattggtacctcggcaaaccaagtattaaagccccactg
gaaatcttggaccgcgaacacatgccgcaaaagatttcattttggttcgctacaggagga
gctggattttgtttaagtcgttcactaggcttgaaaatgaaaccgcttgccagtggcggg
aagttcatcagtattggtgataaaattcggctgcccgatgatgtgactatgggctacatt
gttgagcatcttctcagcaaacaacttacggtggtagaagaattccactcacatttggaa
ccaatgaaatttcttaaacaatcgcatcttgcagaacaaatcaccttcagttactcgcat
tacggacccgaaatgaatgtacttagtttgaatggtttcaacaatcaaatcgacccgtat
aggtttttatccctacattgcaatttgtatccaaacttcagcttctgccctcggtag
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