KEGG   Daphnia magna (water flea): 116922797
Entry
116922797         CDS       T07514                                 
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1 isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    116922797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dmk03000]
    116922797
   04121 Ubiquitin system [BR:dmk04121]
    116922797
   03036 Chromosome and associated proteins [BR:dmk03036]
    116922797
Enzymes [BR:dmk01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     116922797
Transcription factors [BR:dmk03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    116922797
Ubiquitin system [BR:dmk04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     116922797
Chromosome and associated proteins [BR:dmk03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116922797
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     116922797
SSDB
Motif
Pfam: F-box-like JmjC F-box JHD Cupin_8 Beta-prop_RIG_1st PRR20
Other DBs
NCBI-GeneID: 116922797
NCBI-ProteinID: XP_032785112
LinkDB
Position
LG5:complement(8627359..8630651)
AA seq 874 aa
MEDNSHPHSAKRGRKRNRGRGRTSGGSQRKRGGRNNNTDLDDDDDLDLEMAFSTLPSFSL
DVKLSSDKFEHHFVQEMQGKDFTIAYIQKNGFSTPLLFKDKYGLDIKVPKSDFSVGDVRQ
CVGSRRMVDVMEVATQRNLEMTMKEWQQYYESPNKDRLLNVISLEFSHTKLEHMVHPPVI
VSLLDWVEVMWPRALKALQKESTNAMDDMWYPKVQKYCLMSVAGCYTDFHIDFGGTSVWY
HILKGSKVFWLIPPTERNLQLYEQWTLSGKQSDIFFGDLVEKCGRVNLEAGNTFLIPSGW
IHAVYTPSDSLVFGGNFLHSFAIENQLRIAQLEDSTRVPAKFRFPFYTEMLWYVLERYVY
TLLGKDHLDLSQLQQGQTPVEKAIQSQQPHVHLTASELHGLRAIVLYLHSLAPTRKNVPD
LLVNPVALIQDVRTLVEQHRKDQSHLAITGVPVVRVQQPTNSKSKKLLPSSSSIATSLAH
KMDIACNSSRSSVPQITPGCSSSHVSVIVKREVIDIKLEHVVPKNEVHVAIKKEEPVEQS
QEPDSNTVVVTEVRYPPSKMESPFPHLRDQLRQQQQQDMAKKMRQSVVMRHTTVGRIDSQ
VQRRKASGVLLGQLSEKLELILRPEVLIPVFQHLSIADLLVCMQVCRSWNRYSIDPSLWK
LMDLSHRQLTPIMLAGIIRRQPRCLVMDWSSFSHQQCAWLMDRLPNLTTLSMQGCNASVL
DALKLPSLTPAALSRAFQPKLTVLDLSWVSGLNDILIEKFILPSSLHRLSNIRQLALAGS
QLTDKSLIAFATSFPALDSLCLAYCLQLTSHGLRSMLVANNGQLNRIDLMGCTQLLSFDY
PMLQKELCLINPRLCLAEDITSDSQPIHRCFRLS
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggaagataactcgcatcctcactcagcgaagagaggaagaaaaagaaaccgtggaagg
ggacgcacatcaggaggttcgcagagaaaacgaggagggagaaataacaacacagatcta
gatgatgatgatgacttggatcttgaaatggctttcagcacccttccttcattcagcctt
gatgtcaaacttagttcagataagtttgaacatcattttgttcaagagatgcaaggaaaa
gatttcacaattgcatacattcaaaaaaatggcttcagcacacccttattatttaaagac
aaatatggattggatataaaagttccaaaatctgatttctcagttggagatgttagacag
tgtgttggctctagaagaatggtagatgttatggaagttgctacccagagaaacctagaa
atgaccatgaaagaatggcaacaatactatgaaagcccaaataaagaccgtctactaaat
gtcatcagcctggagttttctcacacaaagctagaacatatggttcatcctcctgttata
gttagtcttcttgactgggtagaggttatgtggcctcgtgctctgaaggcacttcaaaaa
gaatctactaatgcaatggatgatatgtggtatcccaaagtccaaaaatattgtttaatg
agtgttgcagggtgttacacagattttcacattgattttggtggcacttcagtctggtat
cacattcttaaaggctcgaaggttttctggttgatacccccgacggagcgaaatttgcag
ttgtatgaacagtggactttgtccggaaaacagagcgatatatttttcggcgatctggtc
gagaagtgtggccgtgttaatttggaggctggcaacactttcctcattccctcgggctgg
atccatgctgtttatacgccgtccgattctcttgtctttggtggcaattttcttcatagc
tttgcaattgaaaatcagttacggattgcacagttagaagatagcactcgggtgccagcg
aaatttcgctttcccttttatacggaaatgctttggtatgttcttgaaagatacgtttac
actctactgggaaaagaccatttggatttgtctcagctccaacaggggcagacacctgtc
gaaaaagctatccaaagtcaacagccacatgtccatttgacagccagtgaactgcatggt
cttagggcaatcgtgctctatttacattcattagctccaacgcgcaagaacgtgcccgat
ctgcttgtaaatcctgtagctctcatacaagacgtacggacactagtagagcagcacaga
aaagaccaatcccacttggctataacaggagtgccagttgttagggtgcagcaaccaacc
aactcgaagagcaagaaactattacctagttcatctagtatcgcaacttctctagcccat
aaaatggacatcgcctgcaattcttcgcgttcgtccgtgccccaaattacgcctggctgt
tccagttctcacgtttccgtaattgtgaaaagagaagttatagatatcaagttggagcat
gtagttccaaaaaatgaagtgcatgttgccattaagaaagaggaaccggtggaacaatcg
caggagcccgacagtaacactgtggtggtgacggaagtcagatacccaccttcaaaaatg
gaatccccctttccgcacctgagagatcagctcaggcagcaacaacaacaagatatggcc
aaaaaaatgcggcagtctgtcgtcatgcgccataccacagttggccgcattgattctcaa
gttcaaagaaggaaagcatctggagttttacttggtcagttatcggaaaagctagaattg
attttgcgaccggaagtcctcataccagtttttcaacatctttctattgctgatttactg
gtttgcatgcaagtctgtcggtcatggaatcgctattctattgatccatctctgtggaag
ttgatggatctctcccatcgacaactaacacctataatgttggccggaattatccgccgc
caacccaggtgcttggtcatggattggtcttccttttcgcatcaacagtgtgcatggctt
atggatcgcctgcccaacttaaccactcttagtatgcaaggctgtaacgcaagcgtcctt
gacgctctaaaacttccttcgcttacgccagctgccctcagtcgtgcgtttcagcctaaa
ctaacggtcctcgatctcagctgggtatctggcttaaatgatattttgatagagaagttt
atcttaccctcctctttacatcgactgtctaatataaggcagttggctttggctggaagt
cagctaaccgataaatctttaattgcgtttgccacctccttcccagcgctagacagtctt
tgtttagcgtactgtttacaacttacgtcacatggattacgttccatgttagttgcgaat
aatggacagttaaatcgaattgatttaatgggctgtactcagttgctgtcatttgactac
ccaatgctacaaaaagaactttgtttgattaatccgaggctttgtttagctgaagacatc
acaagcgattcccagcctattcatcgctgttttcgtttaagttaa

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